DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and kcnk13

DIOPT Version :10

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:XP_002933246.1 Gene:kcnk13 / 100485106 XenbaseID:XB-GENE-983023 Length:409 Species:Xenopus tropicalis


Alignment Length:156 Identity:34/156 - (21%)
Similarity:59/156 - (37%) Gaps:46/156 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   609 LLMLFLAMGVLIFSSLAYFAEKDEKD---TKFVSIPE---------------------------- 642
            |::|:|..|..:||::....||:.|:   .||.:..:                            
 Frog    27 LIILYLLCGAAVFSAIEQPKEKEAKERWQQKFDTFSQKYNLNVSDLRNFLRDYEEANVAGIRVDS 91

  Fly   643 ---------TFWWAGITMTTVGYGDIYPTTALGKVI----GTVCCICGVLVIALPIPIIVNNFAE 694
                     .|::.|..::|:|:|...|.|..||:.    |.:.|...:|...|.:..::...|.
 Frog    92 IRPRWDFTGAFYFVGTVVSTIGFGMTTPATIAGKIFLIFYGLIGCAATILFFNLFLERLITVIAY 156

  Fly   695 FYKNQMRREKALKRREALDRAKREGS 720
            ..|:  ..|:.|||:..|....|.||
 Frog   157 IMKS--FHERQLKRKGGLPPETRRGS 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB_POZ_Shab-like 306..414 CDD:349720
Ion_trans 464..700 CDD:459842 26/134 (19%)
kcnk13XP_002933246.1 Ion_trans_2 <94..151 CDD:462301 13/56 (23%)
Ion_trans_2 213..286 CDD:462301
Blue background indicates that the domain is not in the aligned region.

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