DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and kcnk6

DIOPT Version :10

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:NP_001120420.1 Gene:kcnk6 / 100145504 XenbaseID:XB-GENE-958681 Length:308 Species:Xenopus tropicalis


Alignment Length:105 Identity:31/105 - (29%)
Similarity:47/105 - (44%) Gaps:21/105 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   599 TLRNSYKELGLLMLFLAMGVLIFSSLAYFAEK--------------DEKDTKFVSIPETFWWAGI 649
            :||:..::|..:.|..:..|.: |||..|.||              ...|:|: .|..:.::|..
 Frog    35 SLRDELRQLKSVFLNESPCVNV-SSLEAFLEKIINANKYGVSVLHNASNDSKW-DIASSMFFAST 97

  Fly   650 TMTTVGYGDIYPTTALGKVIGTVCCICGVLVIALPIPIIV 689
            .:||||||...|.|..||..    ||...| |.:|..::|
 Frog    98 LVTTVGYGYTTPLTDSGKAF----CIFYAL-IGVPFTMLV 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB_POZ_Shab-like 306..414 CDD:349720
Ion_trans 464..700 CDD:459842 31/105 (30%)
kcnk6NP_001120420.1 Ion_trans_2 76..141 CDD:462301 20/63 (32%)
Ion_trans_2 <194..251 CDD:462301
Blue background indicates that the domain is not in the aligned region.

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