DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant6 and Galnt5

DIOPT Version :9

Sequence 1:NP_001261342.1 Gene:Pgant6 / 38346 FlyBaseID:FBgn0035375 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_113984.1 Gene:Galnt5 / 83627 RGDID:620361 Length:930 Species:Rattus norvegicus


Alignment Length:678 Identity:228/678 - (33%)
Similarity:330/678 - (48%) Gaps:126/678 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 GVEPVPEKAGLSGDVKV-----KVPAIKQPEPQKPQEPDFEEDP-------------ELQKIDEP 89
            ||.|..:.|.::...|:     ::..|.:.|.||   .|.:|.|             |.|....|
  Rat   292 GVLPEADGAKVAPGKKLNFSESQIVIITKEEGQK---TDTKEVPNSKIQTVFPKLLGESQGKHIP 353

  Fly    90 EPVEEEVDNP-HPADDEPQQQP--QEELQMA---------------APADASVKKDWH-----DY 131
            ....:.:.:| .|.....|.:|  .|||..|               :.|:.|.....|     |.
  Rat   354 RSQSQTLSSPLAPKRAVSQSKPTLAEELHTARSNLTAKATTVGHQQSHANISENPGKHHVLRIDV 418

  Fly   132 TFMEKDAKRVGLGEGGKASTLDDESQRDLEKRMSLENGFNALLSDSISVNRSVPDIRHPLCRKKE 196
            |...:|..  ..|:.|:...:....:::.|:|.. |..||..|||.|.|:|::.|.|...|.::.
  Rat   419 TLSPRDLN--APGQFGRPVVVPPGKKKEAEQRWK-EGNFNVYLSDLIPVDRAIEDTRPAGCAEQL 480

  Fly   197 YVAKLPTVSVIIIFYNEYLSVLMRSVHSLINRSPPELMKEIILVDDHSDREYLGKELETYIAEHF 261
            ....|||.|:|:.|.:|..|.|:|||||::|||||.|:|||:||||.|.::||...|:.|::: |
  Rat   481 VHNDLPTTSIIMCFVDEVWSALLRSVHSVLNRSPPHLIKEILLVDDFSTKDYLKANLDKYMSQ-F 544

  Fly   262 KWVRVVRLPRRTGLIGARAAGARNATAEVLIFLDSHVEANYNWLPPLLEPIALNKRTAVCPFIDV 326
            ..||::||..|.|||.||.|||:|||.:||.|||||||.|..||.||||.:.||::...||.|:|
  Rat   545 PKVRILRLKERHGLIRARLAGAQNATGDVLTFLDSHVECNVGWLEPLLERVYLNRKKVACPVIEV 609

  Fly   327 IDHTNFHYRAQDEGARGAFDW--EFFYKRLP---LLPEDLKHPADPFKSPIMAGGLFAISREFFW 386
            |:..:..|...|...||.|.|  .|.::.:|   :....:|. .|..:.|:||||||:|.:.:|:
  Rat   610 INDKDMSYMTVDNFQRGVFTWPMNFGWRTIPPDVIAKNGIKE-TDIIRCPVMAGGLFSIDKSYFY 673

  Fly   387 ELGGYDEGLDIWGGEQYELSFKIWMCGGEMYDAPCSRIGHIYRGPRNHQPSPRKGDYLHKNYKRV 451
            |||.||.|||:||||..|||||:||||||:...||||:|||:|....:.....:...:.:|..||
  Rat   674 ELGTYDPGLDVWGGENMELSFKVWMCGGEIEIIPCSRVGHIFRNDNPYSFPKDRMKTVERNLVRV 738

  Fly   452 AEVWMDEYKNYLYSHGDGLY-ESVDPGDLTEQKAIRTKLNCKSFKWFMEEVAFDLMKTYPPVDPP 515
            ||||:||||...|.|||.|. :.:|.|:||:|:.:|.||.|:||||:::.|..||..      |.
  Rat   739 AEVWLDEYKELFYGHGDHLIDQGLDVGNLTQQRELRKKLKCQSFKWYLDNVFPDLKA------PV 797

  Fly   516 SYAMGALQNVGNQNLCLDTLGRKKHNKMGMYACADNIKTPQRTQFWELSWKRDLRLRRKKECLDV 580
            ..|.|...|:        .||:                                       |:.:
  Rat   798 VRASGVFINL--------ALGK---------------------------------------CVSI 815

  Fly   581 QIWDANAPVWLWDCHSQGGNQYWYYDYRHKQL-KHGTEGRRCLELLPFSQEVVANKCDTDNRFQQ 644
            :    |..|.|.||  .|.::...::|...:| ||   |..|:..:|....:....||..|...:
  Rat   816 K----NITVVLEDC--DGSSELQQFNYTWVRLIKH---GEWCVAPIPDKGSLTLYPCDNRNNRLK 871

  Fly   645 W---NFGSFNKTALD-----NYSQDLVL 664
            |   :..:|:...:|     :|.|.|.:
  Rat   872 WLHRSASAFHPELVDHIVFESYQQLLCM 899

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant6NP_001261342.1 BcsA 199..>413 CDD:224136 110/218 (50%)
pp-GalNAc-T 205..502 CDD:133004 148/302 (49%)
RICIN 520..647 CDD:238092 22/130 (17%)
Ricin_B_lectin 520..645 CDD:279046 21/125 (17%)
Galnt5NP_113984.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..210
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 344..377 7/32 (22%)
WcaA 484..>599 CDD:223539 66/115 (57%)
Catalytic subdomain A 485..594 64/109 (59%)
pp-GalNAc-T 489..790 CDD:133004 148/302 (49%)
Catalytic subdomain B 654..716 39/61 (64%)
RICIN 804..925 CDD:214672 26/152 (17%)
RICIN 810..924 CDD:238092 24/138 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.