DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant6 and galnt10

DIOPT Version :9

Sequence 1:NP_001261342.1 Gene:Pgant6 / 38346 FlyBaseID:FBgn0035375 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001070072.1 Gene:galnt10 / 767665 ZFINID:ZDB-GENE-030131-595 Length:261 Species:Danio rerio


Alignment Length:229 Identity:110/229 - (48%)
Similarity:140/229 - (61%) Gaps:4/229 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 VEEEVDNPHPADDEPQQQPQEELQMAAPADASVKKDWHDYTFMEKDAKRVGLGEGGKASTLDDES 156
            :|..:|...|.......|.|:..:.....|...|||||||..:..||.|.|.||.|:...|.|..
Zfish    29 LERRLDAEEPEGGAGLAQMQKVNRKQVLKDGVRKKDWHDYAAIRSDAARTGAGEQGRPYPLTDAE 93

  Fly   157 QRDLEKRMSLENGFNALLSDSISVNRSVPDIRHPLCRKKEYVAKLPTVSVIIIFYNEYLSVLMRS 221
            :.|...|   |||||..:||.|::|||:||||||.|:.|.|.|.||..||||.|:||..|.|:|:
Zfish    94 RVDQAYR---ENGFNIFVSDRIALNRSLPDIRHPNCKLKLYTADLPNTSVIIPFHNEGWSSLLRT 155

  Fly   222 VHSLINRSPPELMKEIILVDDHSDREYLGKELETYIAEHFKWVRVVRLPRRTGLIGARAAGARNA 286
            |||:::||||.|:.|||||||.||:.:|...||.|:....| ||::|..:|.|||..|..||..|
Zfish   156 VHSVLDRSPPSLIAEIILVDDFSDKGHLKAPLEQYMVRLPK-VRILRTQKREGLIRTRLLGAAAA 219

  Fly   287 TAEVLIFLDSHVEANYNWLPPLLEPIALNKRTAV 320
            ..:|:.|||||.|||.|||||||:.||.|..::|
Zfish   220 RGQVITFLDSHCEANVNWLPPLLDRIAQNTNSSV 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant6NP_001261342.1 BcsA 199..>413 CDD:224136 66/122 (54%)
pp-GalNAc-T 205..502 CDD:133004 63/116 (54%)
RICIN 520..647 CDD:238092
Ricin_B_lectin 520..645 CDD:279046
galnt10NP_001070072.1 WcaA 134..>260 CDD:223539 65/121 (54%)
Glyco_tranf_GTA_type 139..>253 CDD:299700 62/114 (54%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 86 1.000 Domainoid score I8059
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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