DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant6 and galnt13

DIOPT Version :9

Sequence 1:NP_001261342.1 Gene:Pgant6 / 38346 FlyBaseID:FBgn0035375 Length:666 Species:Drosophila melanogaster
Sequence 2:XP_031748551.1 Gene:galnt13 / 550031 XenbaseID:XB-GENE-1012445 Length:571 Species:Xenopus tropicalis


Alignment Length:538 Identity:196/538 - (36%)
Similarity:296/538 - (55%) Gaps:57/538 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 GLGEGGKASTLDDESQRDLEKRMSLENGFNALLSDSISVNRSVPDIRHPLCRKKEYVAKLPTVSV 206
            |.||.|||..:..:.|..:::...: |.||.:.||.|::|||:||:|...|:.|.|..:||..|:
 Frog    56 GPGELGKAVIIPKDDQEKMKELFKI-NQFNLMASDLIALNRSLPDVRLEGCKTKVYPDELPNTSI 119

  Fly   207 IIIFYNEYLSVLMRSVHSLINRSPPELMKEIILVDDHSDREYLGKELETYIAEHFKWVRVVRLPR 271
            :|:|:||..|.|:|:|||:|||||..|:.|||||||.|:|::|...||.|:......|:::|:.:
 Frog   120 VIVFHNEAWSTLLRTVHSVINRSPHRLISEIILVDDSSERDFLKSPLENYVKHLEVPVKILRMEQ 184

  Fly   272 RTGLIGARAAGARNATAEVLIFLDSHVEANYNWLPPLLEPIALNKRTAVCPFIDVIDHTNFHYRA 336
            |:|||.||..||..|..:::.|||:|.|....||.|||..|..:::|.|||.||||....|.|.|
 Frog   185 RSGLIRARLRGANVAKGQIITFLDAHCECTIGWLEPLLARIKEDRKTVVCPIIDVISDDTFEYMA 249

  Fly   337 QDEGARGAFDWEFFYKRLPLLPEDL-KHPAD---PFKSPIMAGGLFAISREFFWELGGYDEGLDI 397
            ..:...|.|:|:..::..|:...:: :...|   |.::|.||||||:|.:.:|.|||.||.|:||
 Frog   250 GSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDKTYFEELGTYDSGMDI 314

  Fly   398 WGGEQYELSFKIWMCGGEMYDAPCSRIGHIYRGPRNHQPSPRKGDYLHKNYKRVAEVWMDEYKNY 462
            ||||..|:||:||.|||.:....||.:||::|....:......|..::||.:|:||||||::|::
 Frog   315 WGGENLEMSFRIWQCGGSLEIVTCSHVGHVFRKATPYTFPGGTGHVINKNNRRLAEVWMDDFKDF 379

  Fly   463 LYSHGDGLYESVDPGDLTEQKAIRTKLNCKSFKWFMEEVAFDLMKTYPPVDPPS--YAMGALQNV 525
            .|....|:.: ||.||::|:||:|..|.|..|.|::|.|       ||....|.  :::|.::||
 Frog   380 FYIISPGVVK-VDYGDVSERKALRENLKCNPFSWYLETV-------YPDSQIPRRYFSLGEIRNV 436

  Fly   526 GNQNLCLDTLGRKKHNKMGMYAC----ADNIKTPQRTQFWELSWKRDLRLRRKKECLDVQIWDAN 586
             ..|.|||.:|||::.|:|::.|    .:.:          .|:..|..:|....||||.  ..|
 Frog   437 -ETNQCLDNMGRKENEKVGIFNCHGMGGNQV----------FSYTADKEIRTDDLCLDVS--RLN 488

  Fly   587 APVWLWDCHSQGGNQYWYYDYRHKQLKHGTEGRRCLELLPFSQEVVANKCDTDNRFQQWNFG--- 648
            .||.:..||...|||.|.||.......|                ::...|.|.:..:...||   
 Frog   489 GPVIMLKCHHMRGNQLWEYDAETHTFLH----------------IITQSCLTLSNVEDGTFGPTV 537

  Fly   649 ------SFNKTALDNYSQ 660
                  :..:..|.||::
 Frog   538 EFCNGRNQQRWTLRNYTR 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant6NP_001261342.1 BcsA 199..>413 CDD:224136 97/217 (45%)
pp-GalNAc-T 205..502 CDD:133004 129/300 (43%)
RICIN 520..647 CDD:238092 34/130 (26%)
Ricin_B_lectin 520..645 CDD:279046 34/128 (27%)
galnt13XP_031748551.1 pp-GalNAc-T 118..418 CDD:133004 130/307 (42%)
Ricin_B_lectin 431..548 CDD:395527 36/145 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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