DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant6 and Pgant8

DIOPT Version :9

Sequence 1:NP_001261342.1 Gene:Pgant6 / 38346 FlyBaseID:FBgn0035375 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_648800.1 Gene:Pgant8 / 39715 FlyBaseID:FBgn0036529 Length:590 Species:Drosophila melanogaster


Alignment Length:563 Identity:228/563 - (40%)
Similarity:336/563 - (59%) Gaps:31/563 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 EELQMAAPADASVKKDWHDYTFMEKDAKRVGLGEGGKASTLD-DESQRDLEKRMSLENGFNALLS 175
            |..:.|....:.:::|..|...:.:......||..|:.:..: .|.|.:...:...|.|:||.||
  Fly    36 ERDESATSTTSRLERDIRDLQAVFESEVIPDLGALGRPARGNWTEEQLEAIAKSQRETGYNAWLS 100

  Fly   176 DSISVNRSVPDIRHPLCRKKEY-VAKLPTVSVIIIFYNEYLSVLMRSVHSLINRSPPELMKEIIL 239
            ..||..||:.|:||..|:|.:| :.|||:|||:|.::||..|||:|::.||.:|:|.:|::|:||
  Fly   101 KRISPERSLYDMRHRSCKKLKYPMEKLPSVSVVITYHNEEASVLLRTLSSLRSRTPIQLLREVIL 165

  Fly   240 VDDHSDREYLGKELETYIAEHFKWVRVV---RLPRRTGLIGARAAGARNATAEVLIFLDSHVEAN 301
            |||.|.:  ..::|..:|  ..|::.:|   |:..:.||:.||..||..|.|:||:|||||||..
  Fly   166 VDDGSTQ--ADEKLNDFI--KIKFLNMVQHRRITTQVGLMHARVVGAELALADVLVFLDSHVEVT 226

  Fly   302 YNWLPPLLEPIALNKRTAVCPFIDVIDHTNFHYRAQDEGARGAFDWEFFYKRLPLLPEDLKHPAD 366
            ..||.||:.||..:.||...|.||.||..||.|| :.:.:||.|:|||.|.:||||.|:......
  Fly   227 KGWLEPLIAPILEDNRTCTTPIIDTIDFDNFAYR-RGKPSRGFFNWEFNYIQLPLLKEEAVAMPA 290

  Fly   367 PFKSPIMAGGLFAISREFFWELGGYDEGLDIWGGEQYELSFKIWMCGGEMYDAPCSRIGHIYRGP 431
            |.|:|||.||||||.||:|.||||||:||.|||.||:|||.|:|:|||::.:.||||:||::|..
  Fly   291 PHKNPIMNGGLFAIGREWFSELGGYDKGLKIWGAEQFELSLKLWLCGGQILEVPCSRVGHLFRDG 355

  Fly   432 R------NHQPSPRKGDYLHKNYKRVAEVWMDEYKNYLYSHGDGLYESVDP-GDLTEQKAIRTKL 489
            .      |...:..| ..:.:||:||||:|:||||:.|:::...|  :|.| |:|.||:.::.:|
  Fly   356 NFQIRYTNKDKNSEK-KLISRNYRRVAEIWLDEYKDKLFANMPHL--TVIPVGNLAEQRDLKNRL 417

  Fly   490 NCKSFKWFMEEVAFDLMKTYPPVDPPSYAMGALQNVGNQNLCLDTLGRK--KHNKMGMYACADNI 552
            :||.||||::.:|.|.:..||.:||..||.|.||::.:..||||   ||  .|.:..:..|:.:.
  Fly   418 HCKPFKWFLDNLATDFLNLYPILDPAEYASGVLQSISSPKLCLD---RKDPSHGQPKLAPCSSDH 479

  Fly   553 KTPQRTQFWELSWKRDLRLRRKKECLDVQIWDANAPVWLWDCHSQGGNQYWYYDYRHKQLKHGTE 617
            ..|...|:|.|:..|:  ||....||:|:....|  |.::.||.|.|||:|.:|.:..|:..|.:
  Fly   480 VFPSPEQYWSLTNHRE--LRSGFYCLEVRNHGVN--VHIYQCHGQSGNQFWSFDSKTHQVISGQQ 540

  Fly   618 G--RRCLELLPFSQEVVANKCDTDNRFQQWNFGSFNKTALDNY 658
            .  |.|||..|....|.::.||..|..|||.||..|...|.::
  Fly   541 QNFRHCLEAQPELNAVTSSVCDPKNHKQQWKFGYLNSQRLQHF 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant6NP_001261342.1 BcsA 199..>413 CDD:224136 108/216 (50%)
pp-GalNAc-T 205..502 CDD:133004 142/306 (46%)
RICIN 520..647 CDD:238092 45/130 (35%)
Ricin_B_lectin 520..645 CDD:279046 43/128 (34%)
Pgant8NP_648800.1 GT2 128..427 CDD:224137 144/306 (47%)
pp-GalNAc-T 131..430 CDD:133004 142/306 (46%)
Ricin_B_lectin 446..570 CDD:279046 44/130 (34%)
RICIN 448..572 CDD:238092 45/130 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468128
Domainoid 1 1.000 61 1.000 Domainoid score I10175
eggNOG 1 0.900 - - E1_KOG3736
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3364
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D144590at33208
OrthoFinder 1 1.000 - - FOG0001284
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11675
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
87.800

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