DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant6 and Galnt3

DIOPT Version :9

Sequence 1:NP_001261342.1 Gene:Pgant6 / 38346 FlyBaseID:FBgn0035375 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001015032.2 Gene:Galnt3 / 366061 RGDID:1306443 Length:633 Species:Rattus norvegicus


Alignment Length:628 Identity:221/628 - (35%)
Similarity:313/628 - (49%) Gaps:106/628 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 DVKVKVPAIKQPEPQKPQEPDFEEDPELQKIDEPEPVEEEVDNPHPADDEPQQQPQEELQMAAPA 120
            ::|..:|.::...|.| |..|..|.|.||.......::..:|.|          ||:.   .||.
  Rat    72 NIKDAMPKMQIGAPIK-QNIDVPERPCLQGYYTAAELKPVLDRP----------PQDS---NAPG 122

  Fly   121 DASVKKDWHDYTFMEKDAKRVGLGEGGKASTLDDESQRDLEKRMSLENGFNALLSDSISVNRSV- 184
            .:                     |:..|.:.|..|.|::.| |...::.|||..||.||::|.: 
  Rat   123 AS---------------------GKPFKITHLSPEEQKEKE-RGETKHCFNAFASDRISLHRDLG 165

  Fly   185 PDIRHPLCRKKEY--VAKLPTVSVIIIFYNEYLSVLMRSVHSLINRSPPELMKEIILVDDHSDRE 247
            ||.|.|.|.::::  ...|||.||||:|:||..|.|:|:|||::..||..|:||||||||.|..:
  Rat   166 PDTRPPECIEQKFKRCPPLPTTSVIIVFHNEAWSTLLRTVHSVLYSSPAILLKEIILVDDASVDD 230

  Fly   248 YLGKELETYIAEHFKWVRVVRLPRRTGLIGARAAGARNATAEVLIFLDSHVEANYNWLPPLLEPI 312
            ||.::||.|| :.|..|::||...|.|||.||..||..||||.|.|||:|.|..|.||.|||..|
  Rat   231 YLHEKLEEYI-KQFSIVKIVRQQERKGLITARLLGAAVATAETLTFLDAHCECFYGWLEPLLARI 294

  Fly   313 ALNKRTAVCPFIDVIDHTNFHY-RAQDEGA---RGAFDW--EFFYKRLPLLPEDLKHPAD---PF 368
            |.|....|.|.|..||...|.: :....|:   ||.|||  .|.::.||  ..:.:...|   |.
  Rat   295 AENYTAVVSPDIASIDLNTFEFNKPSPYGSNHNRGNFDWSLSFGWESLP--DHEKQRRKDETYPI 357

  Fly   369 KSPIMAGGLFAISREFFWELGGYDEGLDIWGGEQYELSFKIWMCGGEMYDAPCSRIGHIYRGPRN 433
            |:|..|||||:|||::|..:|.|||.::|||||..|:||::|.|||::...|||.:||::|....
  Rat   358 KTPTFAGGLFSISRDYFEHIGSYDEEMEIWGGENIEMSFRVWQCGGQLEIMPCSVVGHVFRSKSP 422

  Fly   434 HQPSPRKGDYLHKNYKRVAEVWMDEYKNYLYSHGDGLYESVDP---GDLTEQKAIRTKLNCKSFK 495
            | ..|:....:.:|..|:|||||||||...|.......:.|..   |||:::..|:.:|.||:|.
  Rat   423 H-TFPKGTQVIARNQVRLAEVWMDEYKEIFYRRNTDAAKIVKQKSFGDLSKRFEIKKRLQCKNFT 486

  Fly   496 WFMEEVAFDLMKTYPPVDPPS---YAMGALQNVGNQNLCLDTLGRKKHNK-MGMYAC---ADNIK 553
            |::..:       ||.|..|.   ...|.:::|| |.||||.....:.:| :.:|.|   ..|  
  Rat   487 WYLNTI-------YPEVYVPDLNPVISGYIKSVG-QPLCLDVGENNQGDKPLILYTCHGLGGN-- 541

  Fly   554 TPQRTQFWELSWKRDLRLRRKKE-CLDVQIWDANAPVWLWDCHSQG------GNQYWYYDYRHKQ 611
                 |::|.|.:|::|...:|| ||..    ....|.|..|..:|      |.|.|  :.|..|
  Rat   542 -----QYFEYSAQREIRHNIQKELCLHA----TQGVVQLKACVYKGHRTIAPGEQIW--EIRKDQ 595

  Fly   612 LKHGTEGRRCL-------ELLPFSQEVVANKCDTDNRFQQWNF 647
            |.:....|.||       .|:|         |||.:..|:|.|
  Rat   596 LLYNPLFRMCLSSNGEHPSLVP---------CDTTDLLQKWIF 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant6NP_001261342.1 BcsA 199..>413 CDD:224136 106/222 (48%)
pp-GalNAc-T 205..502 CDD:133004 136/308 (44%)
RICIN 520..647 CDD:238092 41/144 (28%)
Ricin_B_lectin 520..645 CDD:279046 40/142 (28%)
Galnt3NP_001015032.2 pp-GalNAc-T 188..493 CDD:133004 136/315 (43%)
Ricin_B_lectin 506..627 CDD:279046 40/143 (28%)
RICIN 507..629 CDD:238092 41/144 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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