DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant6 and Pgant3

DIOPT Version :9

Sequence 1:NP_001261342.1 Gene:Pgant6 / 38346 FlyBaseID:FBgn0035375 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_610256.1 Gene:Pgant3 / 35627 FlyBaseID:FBgn0027558 Length:667 Species:Drosophila melanogaster


Alignment Length:587 Identity:188/587 - (32%)
Similarity:282/587 - (48%) Gaps:98/587 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 GLGEGGKASTLDDESQRDLEKRMSLENGFNALLSDSISVNRSVPDIRHPLCRKKEYVAKLPTVSV 206
            |.|..|:...:....:..:::...| |.||.|.||.|.:||::.|.|.|.||.|:|.:.||:.||
  Fly    91 GEGADGRPVVVPPRDRFRMQRFFRL-NSFNLLASDRIPLNRTLKDYRTPECRDKKYASGLPSTSV 154

  Fly   207 IIIFYNEYLSVLMRSVHSLINRSPPELMKEIILVDDHSDREYLGKELETYIAEHFKWVRVVRLPR 271
            ||:|:||..|||:|::.|:|||||..|:||||||||.|||.||.::||:|:.......|:.|:.:
  Fly   155 IIVFHNEAWSVLLRTITSVINRSPRHLLKEIILVDDASDRSYLKRQLESYVKVLAVPTRIFRMKK 219

  Fly   272 RTGLIGARAAGARNATAEVLIFLDSHVEANYNWLPPLLEPIALNKRTAVCPFIDVIDHTNFHYRA 336
            |:||:.||..||.||..:||.|||:|.|.:..||.|||..|..:::..:||.||:|...||.|..
  Fly   220 RSGLVPARLLGAENARGDVLTFLDAHCECSRGWLEPLLSRIKESRKVVICPVIDIISDDNFSYTK 284

  Fly   337 QDEGARGAFDWEFFY------KRLPLLPEDLKHPADPFKSPIMAGGLFAISREFFWELGGYDEGL 395
            ..|...|||:|:..:      ::........|...||..:|.||||||||.|::|:|:|.||..:
  Fly   285 TFENHWGAFNWQLSFRWFSSDRKRQTAGNSSKDSTDPIATPGMAGGLFAIDRKYFYEMGSYDSNM 349

  Fly   396 DIWGGEQYELSFKIWMCGGEMYDAPCSRIGHIYRGPRNHQPSPRKGDYLHKNYKRVAEVWMDEYK 460
            .:||||..|:||:||.|||.:..:|||.:||::|....:.......:.|..|..|.|.||||:::
  Fly   350 RVWGGENVEMSFRIWQCGGRVEISPCSHVGHVFRSSTPYTFPGGMSEVLTDNLARAATVWMDDWQ 414

  Fly   461 NYLYSHGDGL-YESVDPGDLTEQKAIRTKLNCKSFKWFMEEVAFDLMKTYPP--VDPPSYAMGAL 522
            .::..:..|| ..:.|..::||:.|:|.:|.||.|.|::|.:       :|.  ...|....|.:
  Fly   415 YFIMLYTSGLTLGAKDKVNVTERVALRERLQCKPFSWYLENI-------WPEHFFPAPDRFFGKI 472

  Fly   523 QNVGNQNLCLDTLGRKKHNKMGMYACADNIKTPQRTQFWELSWK-----------RDLRLRRKKE 576
            ..:..:..|.....:...|..|.     .:....:..|.|:..|           ||..||..||
  Fly   473 IWLDGETECAQAYSKHMKNLPGR-----ALSREWKRAFEEIDSKAEELMALIDLERDKCLRPLKE 532

  Fly   577 CLDVQIWDANAPVWLWDC--HSQG----------------------------------------- 598
              ||.....:| |.:.||  |:|.                                         
  Fly   533 --DVPRSSLSA-VTVGDCTSHAQSMDMFVITPKGQIMTNDNVCLTYRQQKLGVIKMLKNRNATTS 594

  Fly   599 ----------GNQYWYYDYRHKQLKHGTEGRRCL--------ELLPFSQEVVANKCDTDNRFQQW 645
                      .:|.|.||...:|:.| .:.:.||        .|....:.|::.:||..:..|:|
  Fly   595 NVMLAQCASDSSQLWTYDMDTQQISH-RDTKLCLTLKAATNSRLQKVEKVVLSMECDFKDITQKW 658

  Fly   646 NF 647
            .|
  Fly   659 GF 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant6NP_001261342.1 BcsA 199..>413 CDD:224136 100/219 (46%)
pp-GalNAc-T 205..502 CDD:133004 128/303 (42%)
RICIN 520..647 CDD:238092 35/198 (18%)
Ricin_B_lectin 520..645 CDD:279046 34/196 (17%)
Pgant3NP_610256.1 Glyco_tranf_2_3 150..386 CDD:290369 108/235 (46%)
pp-GalNAc-T 153..457 CDD:133004 128/310 (41%)
Ricin_B_lectin 516..658 CDD:279046 27/145 (19%)
RICIN 524..660 CDD:238092 27/139 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D60373at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11675
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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