DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant6 and Galnt12

DIOPT Version :10

Sequence 1:NP_647749.2 Gene:Pgant6 / 38346 FlyBaseID:FBgn0035375 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001413928.1 Gene:Galnt12 / 313233 RGDID:1562001 Length:576 Species:Rattus norvegicus


Alignment Length:621 Identity:209/621 - (33%)
Similarity:290/621 - (46%) Gaps:154/621 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 EPEPVEEEVDNPHPADDEPQQQPQEELQMAAPADASVKKDWHDYTFMEKDAKRVGLGEGGKASTL 152
            :|.|..    .|||...|| ..|:..|    ||||                    ||..|:|..|
  Rat    44 DPVPTR----TPHPGRHEP-VLPRPPL----PADA--------------------LGAKGEAVRL 79

  Fly   153 DDESQR-DLEKRMSLENGFNALLSDSISVNRSVPDIRHPLCRKKEY-VAKLPTVSVIIIFYNEYL 215
            ..:.:. .|::.....:..|..|||.||::|.:|:..:||||:.:| ...||..||:|.||||..
  Rat    80 QLQGEELRLQEESVQRHQINIYLSDRISLHRRLPERWNPLCREVKYDYDNLPKTSVVIAFYNEAW 144

  Fly   216 SVLMRSVHSLINRSPPELMKEIILVDDHSDREYLGKELETYIAEHFKWVRVVRLPRRTGLIGARA 280
            |.|:|:|:|::..||..|::|:|||||:||||:|.:.|...:::..| ||::|..:|.||:.||.
  Rat   145 STLLRTVYSVLETSPDILLEEVILVDDYSDREHLKEPLANELSQLPK-VRLIRASKREGLVRARL 208

  Fly   281 AGARNATAEVLIFLDSHVEANYNWLPPLLEPIALNKRTAVCPFIDVIDHTNFHYRAQD-EGARGA 344
            .||..|..|||.|||.|.|.:..||.|||:.|...:...|||.|||||...|.|.... |...|.
  Rat   209 LGASAARGEVLTFLDCHCECHEGWLEPLLQRIHEKESAVVCPVIDVIDWNTFEYLGNSGEPQIGG 273

  Fly   345 FDWE--FFYKRLPLLPEDL-KHPADPFKSPIMAGGLFAISREFFWELGGYDEGLDIWGGEQYELS 406
            |||.  |.:..:|.....| :.|.|..:||.|||||||:|:.:|..||.||.|:::||||..|.|
  Rat   274 FDWRLVFTWHVVPQRERKLMRSPIDVIRSPTMAGGLFAVSKRYFEYLGSYDTGMEVWGGENLEFS 338

  Fly   407 FKIWMCGGEMYDAPCSRIGHIYRGPRNHQPSPRKGDYLHK----NYKRVAEVWMDEYKNYLYSHG 467
            |:||.|||.:...|||.:||::         |::..|...    |..|.||||||::|. ||.|.
  Rat   339 FRIWQCGGTLETHPCSHVGHVF---------PKQAPYSRSKALANSVRAAEVWMDDFKE-LYYHR 393

  Fly   468 DGLYESVDPGDLTEQKAIRTKLNCKSFKWFMEEVAFDLMKTYP----PVDPPSYAMGALQNVGNQ 528
            :........||:||:|.:|.||.||.||||::.|       ||    |.|.|.: .|.|:|.|.:
  Rat   394 NPQARLEPFGDVTERKKLRAKLQCKDFKWFLDTV-------YPELHVPEDRPGF-FGMLENRGLR 450

  Fly   529 NLCLDTLGRKKHNKMGMYACADNIKTPQRTQFWELSWKRDLRLRRKKECLDVQIWDANAPVWLWD 593
            ..|||.....::|..|                                          ..|.|:.
  Rat   451 GYCLDYNPPSENNVEG------------------------------------------HQVLLYL 473

  Fly   594 CHSQGGNQYWYYDYRHKQLKHGT----------EGR------RCLELLPFSQEVV---------- 632
            ||..|.||::.|..| :::::.|          ||:      .|.:.:|.:||.|          
  Rat   474 CHGMGQNQFFEYTSR-QEIRYNTRQPEACIAVEEGKDVLIMDLCKDTVPENQEFVLQEDGTLVHK 537

  Fly   633 -ANKC--------DT------------DNRFQQWNF 647
             :.||        ||            ||  |:|.|
  Rat   538 QSGKCVEATEKEFDTSFAPHLRDCSSSDN--QRWLF 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant6NP_647749.2 pp-GalNAc-T 205..502 CDD:133004 134/304 (44%)
beta-trefoil_Ricin_Pgant9-like 515..648 CDD:467340 36/180 (20%)
Galnt12NP_001413928.1 None

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