DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant6 and Galnt11

DIOPT Version :9

Sequence 1:NP_001261342.1 Gene:Pgant6 / 38346 FlyBaseID:FBgn0035375 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001258248.1 Gene:Galnt11 / 311952 RGDID:735097 Length:609 Species:Rattus norvegicus


Alignment Length:661 Identity:227/661 - (34%)
Similarity:333/661 - (50%) Gaps:101/661 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LLISLTLFVLITSWIS----STPYTNKPVH----HGVEPVPEKAGLSGDVKVKVPAIKQPEPQKP 72
            |..|.|..||:..:.:    :.|..|.|:.    ||  |.|:|.         .|...: .|.:.
  Rat    15 LFTSATWTVLLFIYFNFSEVTQPLRNVPIKGSGPHG--PFPKKF---------YPRFTR-GPGRV 67

  Fly    73 QEPDFEEDPELQKIDEPEPVEEEVDNPHPADDEPQQQPQEELQMAAPADASVKKDWHDYTFMEKD 137
            .||.|:.:    ::|  :.:...:::|    |:...:...||.|               .|.|: 
  Rat    68 LEPQFKAN----RMD--DLMNNNIEDP----DKGLSKSSSELGM---------------IFNER- 106

  Fly   138 AKRVGLGEGGKASTLDDESQRDLEKRMSLENGFNALLSDSISVNRSVPDIRHPLCRKKEYVAKLP 202
                            |:..|||..:   ::.||.|:|:.:..:|.|||.|:..||.|.|...||
  Rat   107 ----------------DQELRDLGYQ---KHAFNMLISNRLGYHRDVPDTRNAECRGKSYPTDLP 152

  Fly   203 TVSVIIIFYNEYLSVLMRSVHSLINRSPPELMKEIILVDDHSDREYLGKELETYIAEHF-KWVRV 266
            |.||:|.||||..|.|:|:|||:::|:|..|:.|||||||.||.:.|..||:.||..:. ..|:|
  Rat   153 TASVVICFYNEAFSALLRTVHSVVDRTPAHLLHEIILVDDSSDFDDLKGELDEYIQRYLPAKVKV 217

  Fly   267 VRLPRRTGLIGARAAGARNATAEVLIFLDSHVEANYNWLPPLLEPIALNKRTAVCPFIDVIDHTN 331
            :|..:|.|||..|..||.:||.|||:|||||.|.|..||.|||..|..:..|.|||.||:|....
  Rat   218 IRNMKREGLIRGRMIGAAHATGEVLVFLDSHCEVNVMWLQPLLAIILEDPHTVVCPVIDIISADT 282

  Fly   332 FHYRAQDEGARGAFDWEFFYKRLPLLPEDLKHPAD----PFKSPIMAGGLFAISREFFWELGGYD 392
            ..| :.....||.|:|...:| ..|:|......||    |.:||.|||||||::|::|.:||.||
  Rat   283 LAY-SSSPVVRGGFNWGLHFK-WDLVPVSDLGGADSATAPIRSPTMAGGLFAMNRQYFNDLGQYD 345

  Fly   393 EGLDIWGGEQYELSFKIWMCGGEMYDAPCSRIGHIYRGPRNHQPSPRKGDYLHKNYKRVAEVWMD 457
            .|:||||||..|:||:||||||:::..||||:|||:| .|....||...|.:..|..|:|.||:|
  Rat   346 SGMDIWGGENLEISFRIWMCGGKLFIIPCSRVGHIFR-KRRPYGSPEGQDTMTHNSLRLAHVWLD 409

  Fly   458 EYKNYLYSHGDGLYESVDPGDLTEQKAIRTKLNCKSFKWFMEEVAFDLMKTYP------------ 510
            |||...:|....| ::...|:::|:..:|.||.|:||||:::.|..::..:.|            
  Rat   410 EYKEQYFSLRPDL-KTKSFGNISERVELRKKLGCQSFKWYLDNVYPEMQVSGPKARLQQPVFINR 473

  Fly   511 -PVDPPSYAMGALQNVGNQNLCLDTLGR--KKHNKMGMYACADNIKTPQRTQFWELSWKRDLRLR 572
             |..|.....|.|.:: ..|.||...||  :|...:.:.||  :...|  ||.|..:.:.:|.|.
  Rat   474 GPKRPRVLLRGRLYHL-QTNKCLVAQGRSSQKGGLVLLKAC--DYGDP--TQVWIYNEEHELILN 533

  Fly   573 RKKECLDVQIWDANAPVWLWDCHSQGGNQYWYYDYRHKQLKHGTEGRRCLELLPFSQE---VVAN 634
            ... |||:....::.|..|..||..||:|.|.:. ::.:|...:.| :||.::....:   |...
  Rat   534 NLL-CLDMSETRSSDPPRLMKCHGSGGSQQWTFG-KNNRLYQVSVG-QCLRVVDQMDQKGYVGMA 595

  Fly   635 KCDTDNRFQQW 645
            .||..:. |||
  Rat   596 ICDGSSS-QQW 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant6NP_001261342.1 BcsA 199..>413 CDD:224136 107/218 (49%)
pp-GalNAc-T 205..502 CDD:133004 140/301 (47%)
RICIN 520..647 CDD:238092 37/131 (28%)
Ricin_B_lectin 520..645 CDD:279046 35/129 (27%)
Galnt11NP_001258248.1 pp-GalNAc-T 155..453 CDD:133004 140/301 (47%)
Glyco_tranf_2_3 155..383 CDD:290369 115/230 (50%)
Ricin_B_lectin 484..605 CDD:279046 35/129 (27%)
RICIN 488..607 CDD:238092 35/127 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346051
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.