DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant6 and Galnt13

DIOPT Version :9

Sequence 1:NP_001261342.1 Gene:Pgant6 / 38346 FlyBaseID:FBgn0035375 Length:666 Species:Drosophila melanogaster
Sequence 2:XP_017447163.1 Gene:Galnt13 / 311039 RGDID:735044 Length:571 Species:Rattus norvegicus


Alignment Length:532 Identity:199/532 - (37%)
Similarity:300/532 - (56%) Gaps:45/532 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 GLGEGGKASTLDDESQRDLEKRMSLENGFNALLSDSISVNRSVPDIRHPLCRKKEYVAKLPTVSV 206
            |.||.|||..:..:.|..:::...: |.||.:.||.|::|||:||:|...|:.|.|..:||..||
  Rat    56 GPGEMGKAVLIPKDDQEKMKELFKI-NQFNLMASDLIALNRSLPDVRLEGCKTKVYPDELPNTSV 119

  Fly   207 IIIFYNEYLSVLMRSVHSLINRSPPELMKEIILVDDHSDREYLGKELETYIAEHFKWVRVVRLPR 271
            :|:|:||..|.|:|:|:|:|||||..|:.|:|||||.|:|::|...||.|:......|:::|:..
  Rat   120 VIVFHNEAWSTLLRTVYSVINRSPHYLLSEVILVDDASERDFLKLTLENYVKTLEVPVKIIRMEE 184

  Fly   272 RTGLIGARAAGARNATAEVLIFLDSHVEANYNWLPPLLEPIALNKRTAVCPFIDVIDHTNFHYRA 336
            |:|||.||..||..:..:|:.|||:|.|....||.|||..|..:::|.|||.||||....|.|.|
  Rat   185 RSGLIRARLRGAAASKGQVITFLDAHCECTLGWLEPLLARIKEDRKTVVCPIIDVISDDTFEYMA 249

  Fly   337 QDEGARGAFDWEFFYKRLPLLPEDL-KHPAD---PFKSPIMAGGLFAISREFFWELGGYDEGLDI 397
            ..:...|.|:|:..::..|:...:: :...|   |.::|.||||||:|.|.:|.|:|.||.|:||
  Rat   250 GSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRNYFEEIGTYDAGMDI 314

  Fly   398 WGGEQYELSFKIWMCGGEMYDAPCSRIGHIYRGPRNHQPSPRKGDYLHKNYKRVAEVWMDEYKNY 462
            ||||..|:||:||.|||.:....||.:||::|....:......|..::||.:|:|||||||:|::
  Rat   315 WGGENLEMSFRIWQCGGSLEIVTCSHVGHVFRKATPYTFPGGTGHVINKNNRRLAEVWMDEFKDF 379

  Fly   463 LYSHGDGLYESVDPGDLTEQKAIRTKLNCKSFKWFMEEVAFDLMKTYPPVDPPS--YAMGALQNV 525
            .|....|:.: ||.||::.:|.:|..|.||.|.|::|.:       ||....|.  |::|.::||
  Rat   380 FYIISPGVVK-VDYGDVSVRKTLRENLKCKPFSWYLENI-------YPDSQIPRRYYSLGEIRNV 436

  Fly   526 GNQNLCLDTLGRKKHNKMGMYAC----ADNIKTPQRTQFWELSWKRDLRLRRKKECLDVQIWDAN 586
             ..|.|||.:|||::.|:|::.|    .:.:          .|:..|..:|....||||.  ..:
  Rat   437 -ETNQCLDNMGRKENEKVGIFNCHGMGGNQV----------FSYTADKEIRTDDLCLDVS--RLS 488

  Fly   587 APVWLWDCHSQGGNQYWYYDYRHKQLKHGTEGRRCL---ELLPFSQEVVANKCDTDNRFQQWNFG 648
            .||.:..||...|||.|.||.....|.| ...:.||   ::...||.:....|: |:..|:|   
  Rat   489 GPVIMLKCHHMRGNQLWEYDAETHTLVH-IITQSCLSMGKVADGSQHLTMETCN-DSTLQKW--- 548

  Fly   649 SFNKTALDNYSQ 660
                 .|.||::
  Rat   549 -----LLRNYTR 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant6NP_001261342.1 BcsA 199..>413 CDD:224136 96/217 (44%)
pp-GalNAc-T 205..502 CDD:133004 128/300 (43%)
RICIN 520..647 CDD:238092 40/133 (30%)
Ricin_B_lectin 520..645 CDD:279046 39/131 (30%)
Galnt13XP_017447163.1 pp-GalNAc-T 118..418 CDD:133004 128/307 (42%)
Ricin_B_lectin 431..548 CDD:395527 39/131 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346057
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

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