DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant6 and Galnt2

DIOPT Version :9

Sequence 1:NP_001261342.1 Gene:Pgant6 / 38346 FlyBaseID:FBgn0035375 Length:666 Species:Drosophila melanogaster
Sequence 2:XP_038953584.1 Gene:Galnt2 / 292090 RGDID:1310692 Length:570 Species:Rattus norvegicus


Alignment Length:571 Identity:195/571 - (34%)
Similarity:277/571 - (48%) Gaps:108/571 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 GLGEGGKASTLDDESQRDL------EKRMSLE--------------------------------N 168
            |.|..|..:.:|...::||      ||..|:|                                |
  Rat    37 GAGRKGDWNDIDSIKKKDLHHSRGDEKAQSMETLPPGKVRWPDFNQEAYVGGTMVRSGQDPYARN 101

  Fly   169 GFNALLSDSISVNRSVPDIRHPLCRKKEYVAKLPTVSVIIIFYNEYLSVLMRSVHSLINRSPPEL 233
            .||.:.||.:.::||:||.||..|::|::...||..||:|.|:||..|.|:|:|.|::.||||.|
  Rat   102 KFNQVESDKLRMDRSIPDTRHDQCQRKQWRVDLPATSVVITFHNEARSALLRTVVSVLKRSPPHL 166

  Fly   234 MKEIILVDDHS----DREYLGKELETYIAEHFKWVRVVRLPRRTGLIGARAAGARNATAEVLIFL 294
            :||||||||:|    |...|||         .:.|||:|..||.||:.:|..||..|.|:||.||
  Rat   167 IKEIILVDDYSNDPEDGALLGK---------IEKVRVLRNDRREGLMRSRVRGADAAQAKVLTFL 222

  Fly   295 DSHVEANYNWLPPLLEPIALNKRTAVCPFIDVIDHTNFHYRAQDEGARGAFDWEFFYKRLPLLPE 359
            |||.|.|..||.||||.:|.::...|.|.||||:..||.|.......:|.|||...:|...:.||
  Rat   223 DSHCECNERWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPE 287

  Fly   360 DLK----HPADPFKSPIMAGGLFAISREFFWELGGYDEGLDIWGGEQYELSFKIWMCGGEMYDAP 420
            ..:    :|..|.|:|::|||||.:.:.:|.|||.||..:|:||||..|:||::|.|||.:...|
  Rat   288 QRRSRQGNPVAPIKTPMIAGGLFVMDKLYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIP 352

  Fly   421 CSRIGHIYRGPRNHQPSPRKGDYLHKNYKRVAEVWMDEYKNYLYSHGDGLYESVDPGDLTEQKAI 485
            |||:||::|....:......|....:|.:|.|||||||:|::.|:..... .:|..|::..:..:
  Rat   353 CSRVGHVFRKQHPYTFPGGSGTVFARNTRRAAEVWMDEFKHFYYAAVPSA-RNVPYGNIQSRLEL 416

  Fly   486 RTKLNCKSFKWFMEEVAFDLMKTYPPVDPPSY---AMGALQNVGNQNLCLDTLGRKKHNKMGMYA 547
            |.||.||.|||:::.|       ||.:..|.:   |.||||...|   ||||||......:|:|.
  Rat   417 RKKLGCKPFKWYLDNV-------YPELRVPDHQDIAFGALQQGTN---CLDTLGHFADGVVGIYE 471

  Fly   548 CADNIKTPQRTQFWELSWKRDLRLRRKKECLDVQIWDANAPVWLWDCHSQGGNQYWYYDYRHKQL 612
            |    ......|.|.|:  ::..::....||.|......:.:.|..|......|.|.....:.:|
  Rat   472 C----HNAGGNQEWALT--KEKSVKHMDLCLTVVDRSPGSLIRLQGCRENDSRQKWEQIEGNSKL 530

  Fly   613 KHGTEGRRCLELLPFSQEVVANKCDTDNR----------------FQQWNF 647
            :|                |.:|.| .|:|                .|||.|
  Rat   531 RH----------------VGSNLC-LDSRTAKSGGLSVEVCGPALSQQWKF 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant6NP_001261342.1 BcsA 199..>413 CDD:224136 100/221 (45%)
pp-GalNAc-T 205..502 CDD:133004 130/304 (43%)
RICIN 520..647 CDD:238092 34/142 (24%)
Ricin_B_lectin 520..645 CDD:279046 32/140 (23%)
Galnt2XP_038953584.1 pp-GalNAc-T 138..433 CDD:133004 131/311 (42%)
Ricin_B_lectin 445..562 CDD:395527 33/142 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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