DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant6 and Galnt13

DIOPT Version :9

Sequence 1:NP_001261342.1 Gene:Pgant6 / 38346 FlyBaseID:FBgn0035375 Length:666 Species:Drosophila melanogaster
Sequence 2:XP_036018146.1 Gene:Galnt13 / 271786 MGIID:2139447 Length:613 Species:Mus musculus


Alignment Length:582 Identity:200/582 - (34%)
Similarity:300/582 - (51%) Gaps:103/582 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 GLGEGGKASTLDDESQRDLEKRMSLENGFNALLSDSISVNRSVPDIR------------------ 188
            |.||.|||..:..:.|..:::...: |.||.:.||.|::|||:||:|                  
Mouse    56 GPGEMGKAVLIPKDDQEKMKELFKI-NQFNLMASDLIALNRSLPDVRLEGQYCCGRCEELQTMQQ 119

  Fly   189 ------------------------HPLCRKKEYVAKLPTVSVIIIFYNEYLSVLMRSVHSLINRS 229
                                    ...|:.|.|..:||..||:|:|:||..|.|:|:|:|:||||
Mouse   120 ERYARVYISTNFCSSILFWLKCNTELRCKTKVYPDELPNTSVVIVFHNEAWSTLLRTVYSVINRS 184

  Fly   230 PPELMKEIILVDDHSDREYLGKELETYIAEHFKWVRVVRLPRRTGLIGARAAGARNATAEVLIFL 294
            |..|:.|:|||||.|:|::|...||.|:......|:::|:..|:|||.||..||..:..:|:.||
Mouse   185 PHYLLSEVILVDDASERDFLKLTLENYVKTLEVPVKIIRMEERSGLIRARLRGAAASKGQVITFL 249

  Fly   295 DSHVEANYNWLPPLLEPIALNKRTAVCPFIDVIDHTNFHYRAQDEGARGAFDWEFFYKRLPLLPE 359
            |:|.|....||.|||..|..:::|.|||.||||....|.|.|..:...|.|:|:..::..|:...
Mouse   250 DAHCECTLGWLEPLLARIKEDRKTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQR 314

  Fly   360 DL-KHPAD---PFKSPIMAGGLFAISREFFWELGGYDEGLDIWGGEQYELSFKIWMCGGEMYDAP 420
            :: :...|   |.::|.||||||:|.|.:|.|:|.||.|:||||||..|:||:||.|||.:....
Mouse   315 EMDRRKGDRTLPVRTPTMAGGLFSIDRNYFEEIGTYDAGMDIWGGENLEMSFRIWQCGGSLEIVT 379

  Fly   421 CSRIGHIYRGPRNHQPSPRKGDYLHKNYKRVAEVWMDEYKNYLYSHGDGLYESVDPGDLTEQKAI 485
            ||.:||::|....:......|..::||.:|:|||||||:|::.|....|:.: ||.||::.:|.:
Mouse   380 CSHVGHVFRKATPYTFPGGTGHVINKNNRRLAEVWMDEFKDFFYIISPGVVK-VDYGDVSVRKTL 443

  Fly   486 RTKLNCKSFKWFMEEVAFDLMKTYPPVDPPS--YAMGALQNVGNQNLCLDTLGRKKHNKMGMYAC 548
            |..|.||.|.|::|.:       ||....|.  |::|.::|| ..|.|||.:|||::.|:|::.|
Mouse   444 RENLKCKPFSWYLENI-------YPDSQIPRRYYSLGEIRNV-ETNQCLDNMGRKENEKVGIFNC 500

  Fly   549 ----ADNIKTPQRTQFWELSWKRDLRLRRKKECLDVQIWDANAPVWLWDCHSQGGNQYWYYDYRH 609
                .:.:          .|:..|..:|....||||.  ..:.||.:..||...|||.|.||...
Mouse   501 HGMGGNQV----------FSYTADKEIRTDDLCLDVS--RLSGPVIMLKCHHMRGNQLWEYDAET 553

  Fly   610 KQLKH-----------GTEGRRCLELLPFSQEVVANKCDTDNRFQQWNFGSFNKTALDNYSQ 660
            ..|.|           |.:|         ||::....|: |:.||:|        .|.||::
Mouse   554 HTLVHIITQSCLSMGKGEDG---------SQDLSMETCN-DSTFQKW--------LLRNYTR 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant6NP_001261342.1 BcsA 199..>413 CDD:224136 96/217 (44%)
pp-GalNAc-T 205..502 CDD:133004 128/300 (43%)
RICIN 520..647 CDD:238092 41/141 (29%)
Ricin_B_lectin 520..645 CDD:279046 40/139 (29%)
Galnt13XP_036018146.1 pp-GalNAc-T 160..460 CDD:133004 128/307 (42%)
Ricin_B_lectin 473..590 CDD:395527 40/139 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842600
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

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