DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant6 and GALNT2

DIOPT Version :9

Sequence 1:NP_001261342.1 Gene:Pgant6 / 38346 FlyBaseID:FBgn0035375 Length:666 Species:Drosophila melanogaster
Sequence 2:XP_016856452.1 Gene:GALNT2 / 2590 HGNCID:4124 Length:636 Species:Homo sapiens


Alignment Length:533 Identity:182/533 - (34%)
Similarity:257/533 - (48%) Gaps:136/533 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 APADASVKKDWHDYTFMEKDAKRVGLGEGGKASTLDDESQRDL------EKRMSLE--------- 167
            |...|..|:||::                     :|...::||      ||..|:|         
Human    35 AGGGAGRKEDWNE---------------------IDPIKKKDLHHSNGEEKAQSMETLPPGKVRW 78

  Fly   168 -----------------------NGFNALLSDSISVNRSVPDIRHPLCRKKEYVAKLPTVSVIII 209
                                   |.||.:.||.:.::|::||.||..|::|::...||..||:|.
Human    79 PDFNQEAYVGGTMVRSGQDPYARNKFNQVESDKLRMDRAIPDTRHDQCQRKQWRVDLPATSVVIT 143

  Fly   210 FYNEYLSVLMRSVHSLINRSPPELMKEIILVDDHS----DREYLGKELETYIAEHFKWVRVVRLP 270
            |:||..|.|:|:|.|::.:|||.|:||||||||:|    |...|||         .:.|||:|..
Human   144 FHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLGK---------IEKVRVLRND 199

  Fly   271 RRTGLIGARAAGARNATAEVLIFLDSHVEANYNWLPPLLEPIALNKRTAVCPFIDVIDHTNFHYR 335
            ||.||:.:|..||..|.|:||.|||||.|.|.:||.||||.:|.::...|.|.||||:..||.|.
Human   200 RREGLMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIIDVINMDNFQYV 264

  Fly   336 AQDEGARGAFDWEFFYKRLPLLPEDLK----HPADPFKSPIMAGGLFAISREFFWELGGYDEGLD 396
            ......:|.|||...:|...:.||..:    :|..|.|:|::|||||.:.:.:|.|||.||..:|
Human   265 GASADLKGGFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMD 329

  Fly   397 IWGGEQYELSFKIWMCGGEMYDAPCSRIGHIYRGPRNHQPSPRKGDYLHKNYKRVAEVWMDEYKN 461
            :||||..|:||::|.|||.:...||||:||::|....:......|....:|.:|.||||||||||
Human   330 VWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKN 394

  Fly   462 YLYSHGDGLYESVDPGDLTEQKAIRTKLNCKSFKWFMEEVAFDLMKTYPPVDPPSY---AMGALQ 523
            :.|:..... .:|..|::..:..:|.||:||.|||::|.|       ||.:..|.:   |.||||
Human   395 FYYAAVPSA-RNVPYGNIQSRLELRKKLSCKPFKWYLENV-------YPELRVPDHQDIAFGALQ 451

  Fly   524 NVGNQNLCLDTLGRKKHNKMGMYACADNIKTPQRTQFWELSWKRDLRLRRKKECLDVQIWDANAP 588
            ...|   ||||||......:|:|                                          
Human   452 QGTN---CLDTLGHFADGVVGVY------------------------------------------ 471

  Fly   589 VWLWDCHSQGGNQ 601
                :||:.||||
Human   472 ----ECHNAGGNQ 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant6NP_001261342.1 BcsA 199..>413 CDD:224136 99/221 (45%)
pp-GalNAc-T 205..502 CDD:133004 132/304 (43%)
RICIN 520..647 CDD:238092 19/82 (23%)
Ricin_B_lectin 520..645 CDD:279046 19/82 (23%)
GALNT2XP_016856452.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.