DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant6 and Galnt18

DIOPT Version :9

Sequence 1:NP_001261342.1 Gene:Pgant6 / 38346 FlyBaseID:FBgn0035375 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_776100.2 Gene:Galnt18 / 233733 MGIID:2446239 Length:622 Species:Mus musculus


Alignment Length:692 Identity:206/692 - (29%)
Similarity:315/692 - (45%) Gaps:150/692 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 ASLLLLISLT--LFVLITSWISSTPYTNKPVHHGVEPVPEKAGLSGDVKVKVPAIKQPEPQKPQE 74
            ::.::|..:|  :.:|...|:  |.|.......|.||||:|                        
Mouse    12 STCVILSGMTNIICLLYVGWV--TNYIASVYVRGQEPVPDK------------------------ 50

  Fly    75 PDFEEDPE-----LQKIDEPEPV-----EEEVDNPHPADDEPQQQPQEELQMAAPADASVKKDWH 129
             ..|||..     ::::|..|.|     :|....|..|:.||.            .|:|:...| 
Mouse    51 -KLEEDKGDTLKIIERLDHLENVIKQHIQEAPAKPEEAEAEPF------------TDSSLFAHW- 101

  Fly   130 DYTFMEKDAKRVGLGEGGKASTLDDESQRDLEKRMSLENGFNALLSDSISVNRSVPDIRHPLCRK 194
                               ...|..|.:|...|:... .|:||.|||.:.::|.:||:|...||.
Mouse   102 -------------------GQELSPEGRRVALKQFQY-YGYNAYLSDRLPLDRPLPDLRPSGCRN 146

  Fly   195 KEYVAKLPTVSVIIIFYNEYLSVLMRSVHSLINRSPPELMKEIILVDDHSDREYLGKELETYI-- 257
            ..:...||.||::.||.||.||||:||:||.:.|:|..|:||||||||:|..|.|.::|..|:  
Mouse   147 LSFPDSLPEVSIVFIFVNEALSVLLRSIHSAMERTPSHLLKEIILVDDNSSNEELKEKLTEYVDK 211

  Fly   258 --AEHFKWVRVVRLPRRTGLIGARAAGARNATAEVLIFLDSHVEANYNWLPPLLEPIALNKRTAV 320
              .:...:::|||..::.|||.:|.:|.|.|||.|:...|:|||.|..|..|:|..|..|::..:
Mouse   212 VNGQKPGFIKVVRHSKQEGLIRSRVSGWRAATAPVVALFDAHVEFNVGWAEPVLTRIKENRKRII 276

  Fly   321 CPFIDVIDHTNFHYRAQDEGARGAFDWEFF--YKRLPLLPEDLKHPADPFKSPIMAGGLFAISRE 383
            .|..|.|.:.||........|:| ||||.:  |...|.....|::...|.:||.:. |.|.:.|:
Mouse   277 SPSFDNIKYDNFEIEEYPLAAQG-FDWELWCRYLNPPKAWWKLENSTAPIRSPALI-GCFIVDRQ 339

  Fly   384 FFWELGGYDEGLDIWGGEQYELSFK---------------IWMCGGEMYDAPCSRIGHIYRGPRN 433
            :|.|:|..|||::::|||..||..:               :|.|||.:...|||||.||.|.   
Mouse   340 YFEEIGLLDEGMEVYGGENVELGIRVSEISHTGLSSAPMMVWQCGGSVEVLPCSRIAHIERA--- 401

  Fly   434 HQP-SPRKGDYLHKNYKRVAEVWMDEYKNYLYSHGDGLYE--SVDPGDLTEQKAIRTKLNCKSFK 495
            |:| :.....::.:|..|||||||||:|:::|...:...|  .:|.||:|.:||:|.:|.||:|:
Mouse   402 HKPYTEDLTAHVRRNALRVAEVWMDEFKSHVYMAWNIPQEDSGIDIGDITARKALRKQLQCKTFR 466

  Fly   496 WFMEEVAFDLMKTYPPVDPPSYAMGALQNVGNQNLCLDTLGRKKHNKMGMYACADNIKTPQRTQF 560
            |::..| :..|:.|..:    .|.|.|||....:||||. |....|...:|.|  :..|||...:
Mouse   467 WYLVSV-YPEMRMYSDI----IAYGVLQNSLKTDLCLDQ-GPDTENVPIVYIC--HGMTPQNVYY 523

  Fly   561 WELSWKRDLRLRRKKECLDVQ----IWDANAPVWLWDC-------------HSQGGNQYWYYDYR 608
               :..:.:.:......:|..    :.|.|:...|.:|             .||||:        
Mouse   524 ---TSSQQIHVGILSPTVDDDDNRCLVDVNSRPRLIECSYAKAKRMKLHWQFSQGGS-------- 577

  Fly   609 HKQLKHGTEGRRCLEL-----LPFSQEVVANKCDTDNRFQQW 645
                ....:.:|||||     :.|..::|..||..    |.|
Mouse   578 ----IQNRKSKRCLELQENSDMEFGFQLVLQKCSG----QHW 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant6NP_001261342.1 BcsA 199..>413 CDD:224136 87/234 (37%)
pp-GalNAc-T 205..502 CDD:133004 122/320 (38%)
RICIN 520..647 CDD:238092 35/148 (24%)
Ricin_B_lectin 520..645 CDD:279046 34/146 (23%)
Galnt18NP_776100.2 Catalytic subdomain A 153..267 53/113 (47%)
pp-GalNAc-T 157..473 CDD:133004 123/321 (38%)
Catalytic subdomain B 324..400 28/76 (37%)
Ricin_B_lectin 484..611 CDD:279046 35/148 (24%)
RICIN 486..613 CDD:238092 35/148 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.