DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant6 and Galnt12

DIOPT Version :9

Sequence 1:NP_001261342.1 Gene:Pgant6 / 38346 FlyBaseID:FBgn0035375 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_766281.1 Gene:Galnt12 / 230145 MGIID:2444664 Length:576 Species:Mus musculus


Alignment Length:621 Identity:207/621 - (33%)
Similarity:291/621 - (46%) Gaps:154/621 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 EPEPVEEEVDNPHPADDEPQQQPQEELQMAAPADASVKKDWHDYTFMEKDAKRVGLGEGGKASTL 152
            :|.|..    .|.|...|| ..|:..|    ||||                    ||..|:|..|
Mouse    44 DPGPPR----TPLPGRHEP-VLPRPPL----PADA--------------------LGAHGEAVRL 79

  Fly   153 DDESQR-DLEKRMSLENGFNALLSDSISVNRSVPDIRHPLCRKKEY-VAKLPTVSVIIIFYNEYL 215
            ..:.:. .|::....::..|..|||.||::|.:|:..:||||:.:| ...||..||:|.||||..
Mouse    80 QLQGEELRLQEESVKQHQINIYLSDRISLHRRLPERWNPLCREVKYDYDNLPKTSVVIAFYNEAW 144

  Fly   216 SVLMRSVHSLINRSPPELMKEIILVDDHSDREYLGKELETYIAEHFKWVRVVRLPRRTGLIGARA 280
            |.|:|:|:|::..||..|::|:|||||:||||:|.:.|...:::..| ||::|..||.||:.||.
Mouse   145 STLLRTVYSVLETSPDILLEEVILVDDYSDREHLKERLANELSQLPK-VRLIRASRREGLVRARL 208

  Fly   281 AGARNATAEVLIFLDSHVEANYNWLPPLLEPIALNKRTAVCPFIDVIDHTNFHYRAQD-EGARGA 344
            .||..|..|||.|||.|.|.:..||.|||:.|...:...|||.|||||...|.|.... |...|.
Mouse   209 LGASAARGEVLTFLDCHCECHEGWLEPLLQRIHEKESAVVCPVIDVIDWNTFEYLGNSGEPQIGG 273

  Fly   345 FDWE--FFYKRLPLLP-EDLKHPADPFKSPIMAGGLFAISREFFWELGGYDEGLDIWGGEQYELS 406
            |||.  |.:..:|... :.::.|.|..:||.|||||||:|:.:|..||.||.|:::||||..|.|
Mouse   274 FDWRLVFTWHVVPQRERQSMRSPIDVIRSPTMAGGLFAVSKRYFDYLGSYDTGMEVWGGENLEFS 338

  Fly   407 FKIWMCGGEMYDAPCSRIGHIYRGPRNHQPSPRKGDYLHK----NYKRVAEVWMDEYKNYLYSHG 467
            |:||.|||.:...|||.:||::         |::..|...    |..|.|||||||:|. ||.|.
Mouse   339 FRIWQCGGTLETHPCSHVGHVF---------PKQAPYSRSKALANSVRAAEVWMDEFKE-LYYHR 393

  Fly   468 DGLYESVDPGDLTEQKAIRTKLNCKSFKWFMEEVAFDLMKTYP----PVDPPSYAMGALQNVGNQ 528
            :........||:||:|.:|.||.||.||||::.|       ||    |.|.|.: .|.|||.|.:
Mouse   394 NPQARLEPFGDVTERKKLRAKLQCKDFKWFLDTV-------YPELHVPEDRPGF-FGMLQNRGLR 450

  Fly   529 NLCLDTLGRKKHNKMGMYACADNIKTPQRTQFWELSWKRDLRLRRKKECLDVQIWDANAPVWLWD 593
            ..|||.....:::..|                                          ..|.|:.
Mouse   451 GYCLDYNPPNENHVEG------------------------------------------HQVLLYL 473

  Fly   594 CHSQGGNQYWYYDYRHKQLKHGT----------EGR------RCLELLPFSQEVV---------- 632
            ||..|.||::.|..| |::::.|          :|:      .|.|.:|.:||.:          
Mouse   474 CHGMGQNQFFEYTTR-KEIRYNTRQPEACITVEDGKDTLVMDLCRETVPENQEFILQEDGTLVHK 537

  Fly   633 -ANKC--------------------DTDNRFQQWNF 647
             :.||                    ::||  |:|.|
Mouse   538 HSRKCVEATEKVLDNGFAPYLRDCTNSDN--QRWFF 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant6NP_001261342.1 BcsA 199..>413 CDD:224136 100/217 (46%)
pp-GalNAc-T 205..502 CDD:133004 135/304 (44%)
RICIN 520..647 CDD:238092 32/173 (18%)
Ricin_B_lectin 520..645 CDD:279046 31/171 (18%)
Galnt12NP_766281.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 38..58 4/17 (24%)
WcaA 129..424 CDD:223539 136/305 (45%)
Catalytic subdomain A 130..239 55/109 (50%)
pp-GalNAc-T 134..428 CDD:133004 136/311 (44%)
Catalytic subdomain B 299..361 33/70 (47%)
Ricin_B_lectin 440..569 CDD:279046 31/174 (18%)
RICIN 442..571 CDD:238092 32/173 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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