DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant6 and Galnt12

DIOPT Version :10

Sequence 1:NP_647749.2 Gene:Pgant6 / 38346 FlyBaseID:FBgn0035375 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_766281.1 Gene:Galnt12 / 230145 MGIID:2444664 Length:576 Species:Mus musculus


Alignment Length:619 Identity:208/619 - (33%)
Similarity:290/619 - (46%) Gaps:150/619 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 EPEPVEEEVDNPHPADDEPQQQPQEELQMAAPADASVKKDWHDYTFMEKDAKRVGLGEGGKASTL 152
            :|.|..    .|.|...|| ..|:..|    ||||                    ||..|:|..|
Mouse    44 DPGPPR----TPLPGRHEP-VLPRPPL----PADA--------------------LGAHGEAVRL 79

  Fly   153 DDESQR-DLEKRMSLENGFNALLSDSISVNRSVPDIRHPLCRKKEY-VAKLPTVSVIIIFYNEYL 215
            ..:.:. .|::....::..|..|||.||::|.:|:..:||||:.:| ...||..||:|.||||..
Mouse    80 QLQGEELRLQEESVKQHQINIYLSDRISLHRRLPERWNPLCREVKYDYDNLPKTSVVIAFYNEAW 144

  Fly   216 SVLMRSVHSLINRSPPELMKEIILVDDHSDREYLGKELETYIAEHFKWVRVVRLPRRTGLIGARA 280
            |.|:|:|:|::..||..|::|:|||||:||||:|.:.|...:::..| ||::|..||.||:.||.
Mouse   145 STLLRTVYSVLETSPDILLEEVILVDDYSDREHLKERLANELSQLPK-VRLIRASRREGLVRARL 208

  Fly   281 AGARNATAEVLIFLDSHVEANYNWLPPLLEPIALNKRTAVCPFIDVIDHTNFHYRAQD-EGARGA 344
            .||..|..|||.|||.|.|.:..||.|||:.|...:...|||.|||||...|.|.... |...|.
Mouse   209 LGASAARGEVLTFLDCHCECHEGWLEPLLQRIHEKESAVVCPVIDVIDWNTFEYLGNSGEPQIGG 273

  Fly   345 FDWE--FFYKRLPLLP-EDLKHPADPFKSPIMAGGLFAISREFFWELGGYDEGLDIWGGEQYELS 406
            |||.  |.:..:|... :.::.|.|..:||.|||||||:|:.:|..||.||.|:::||||..|.|
Mouse   274 FDWRLVFTWHVVPQRERQSMRSPIDVIRSPTMAGGLFAVSKRYFDYLGSYDTGMEVWGGENLEFS 338

  Fly   407 FKIWMCGGEMYDAPCSRIGHIYRGPRNHQPSPRKGDYLHK----NYKRVAEVWMDEYKNYLYSHG 467
            |:||.|||.:...|||.:||::         |::..|...    |..|.|||||||:|. ||.|.
Mouse   339 FRIWQCGGTLETHPCSHVGHVF---------PKQAPYSRSKALANSVRAAEVWMDEFKE-LYYHR 393

  Fly   468 DGLYESVDPGDLTEQKAIRTKLNCKSFKWFMEEVAFDLMKTYP----PVDPPSYAMGALQNVGNQ 528
            :........||:||:|.:|.||.||.||||::.|       ||    |.|.|.: .|.|||.|.:
Mouse   394 NPQARLEPFGDVTERKKLRAKLQCKDFKWFLDTV-------YPELHVPEDRPGF-FGMLQNRGLR 450

  Fly   529 NLCLDTLGRKKHNKMGMYACADNIKTPQRTQFWELSWKRDLRLRRKKECLDVQIWDANAPVWLWD 593
            ..|||.....:::..|                                          ..|.|:.
Mouse   451 GYCLDYNPPNENHVEG------------------------------------------HQVLLYL 473

  Fly   594 CHSQGGNQYWYYDYRHKQLKHGT----------EGR------RCLELLPFSQEVV---------- 632
            ||..|.||::.|..| |::::.|          :|:      .|.|.:|.:||.:          
Mouse   474 CHGMGQNQFFEYTTR-KEIRYNTRQPEACITVEDGKDTLVMDLCRETVPENQEFILQEDGTLVHK 537

  Fly   633 -ANKC------DTDNRF------------QQWNF 647
             :.||      ..||.|            |:|.|
Mouse   538 HSRKCVEATEKVLDNGFAPYLRDCTNSDNQRWFF 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant6NP_647749.2 pp-GalNAc-T 205..502 CDD:133004 135/304 (44%)
beta-trefoil_Ricin_Pgant9-like 515..648 CDD:467340 35/178 (20%)
Galnt12NP_766281.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 38..58 4/17 (24%)
Catalytic subdomain A 130..239 55/109 (50%)
pp-GalNAc-T 134..428 CDD:133004 136/311 (44%)
Catalytic subdomain B 299..361 33/70 (47%)
beta-trefoil_Ricin-like 438..574 CDD:483949 35/178 (20%)

Return to query results.
Submit another query.