DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant6 and Galnt17

DIOPT Version :10

Sequence 1:NP_647749.2 Gene:Pgant6 / 38346 FlyBaseID:FBgn0035375 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_660253.2 Gene:Galnt17 / 212996 MGIID:2137594 Length:598 Species:Mus musculus


Alignment Length:493 Identity:182/493 - (36%)
Similarity:271/493 - (54%) Gaps:24/493 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 GLGEGGKASTLDDESQRDLEKRMSLENGFNALLSDSISVNRSVPDIRHPLCRKKEYVAKLPTVSV 206
            |.|:||..:|| ..|:.:..|....:.|:|:.||:.||::||:||.|...|::.:|..:||.:|:
Mouse    93 GRGKGGLPATL-SPSEEEKAKGPHEKYGYNSYLSEKISLDRSIPDYRPTKCKELKYSKELPQISI 156

  Fly   207 IIIFYNEYLSVLMRSVHSLINRSPPELMKEIILVDDHSDREYLGKELETYIAEHFK-WVRVVRLP 270
            |.||.||.|||::|||||.:|.:|..|:||||||||:||.|.|...||.|:.:.:. .|:|||..
Mouse   157 IFIFVNEALSVILRSVHSAVNHTPTHLLKEIILVDDNSDEEELKAPLEEYVHKRYPGLVKVVRNQ 221

  Fly   271 RRTGLIGARAAGARNATAEVLIFLDSHVEANYNWLPPLLEPIALNKRTAVCPFIDVIDHTNFHYR 335
            :|.|||.||..|.:.||.:|..|.|:|||....|..|:|..|..|::..:.|.||.|...||..:
Mouse   222 KREGLIRARIEGWKAATGQVTGFFDAHVEFTAGWAEPVLSRIQENRKRVILPSIDNIKQDNFEVQ 286

  Fly   336 AQDEGARGAFDWEFF--YKRLPLLPEDLKHPADPFKSPIMAGGLFAISREFFWELGGYDEGLDIW 398
            ..:..|.| :.||.:  |...|....|...|:.|.::|.|.|..|.::|:||.|:|..|.|:|::
Mouse   287 RYENSAHG-YSWELWCMYISPPKDWWDAGDPSLPIRTPAMIGCSFVVNRKFFGEIGLLDPGMDVY 350

  Fly   399 GGEQYELSFKIWMCGGEMYDAPCSRIGHIYRGPRNHQPSPRKGDYLHKNYKRVAEVWMDEYKNYL 463
            |||..||..|:|:|||.|...||||:.||.|..:.:  :...|.|..:|..||||||||:||:::
Mouse   351 GGENIELGIKVWLCGGSMEVLPCSRVAHIERKKKPY--NSNIGFYTKRNALRVAEVWMDDYKSHV 413

  Fly   464 YSHGDGLYES--VDPGDLTEQKAIRTKLNCKSFKWFMEEVAFDLMKTYPPVDPPSYAMGALQNVG 526
            |...:...|:  :|.||::|:||:|..|.||:|:|:::.| :..|:.|    ..:.|.|.|:|..
Mouse   414 YIAWNLPLENPGIDIGDVSERKALRKSLKCKNFQWYLDHV-YPEMRRY----NNTIAYGELRNNK 473

  Fly   527 NQNLCLDTLGRKKHNKMGMYAC---ADNIKTPQRTQFWELSWKRDLRLRRKKECLDVQIWDANAP 588
            .:::|||....:.|..: :|.|   ...:....:..|..|.......|.....|| |....:..|
Mouse   474 AKDVCLDQGPLENHTAI-LYPCHGWGPQLARYTKEGFLHLGALGTTTLLPDTRCL-VDNSKSRLP 536

  Fly   589 VWLWDCHSQGGNQY--WYYDYRHKQLKHGTEGRRCLEL 624
             .|.||.....:.|  |.:......:..||  .||||:
Mouse   537 -QLLDCDKVKSSLYKRWNFIQNGAIMNKGT--GRCLEV 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant6NP_647749.2 pp-GalNAc-T 205..502 CDD:133004 128/301 (43%)
beta-trefoil_Ricin_Pgant9-like 515..648 CDD:467340 28/115 (24%)
Galnt17NP_660253.2 Catalytic subdomain A 151..262 56/110 (51%)
pp-GalNAc-T 155..454 CDD:133004 129/302 (43%)
Catalytic subdomain B 319..381 30/61 (49%)
beta-trefoil_Ricin_GALNT17 457..598 CDD:467352 30/124 (24%)

Return to query results.
Submit another query.