DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant6 and gly-10

DIOPT Version :9

Sequence 1:NP_001261342.1 Gene:Pgant6 / 38346 FlyBaseID:FBgn0035375 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001041036.2 Gene:gly-10 / 178343 WormBaseID:WBGene00001635 Length:703 Species:Caenorhabditis elegans


Alignment Length:597 Identity:283/597 - (47%)
Similarity:370/597 - (61%) Gaps:38/597 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 PDFEEDPEL---QKIDEPEPVEEEVDNPHPADDEPQQQPQEELQMAAPADASVKKDWHDYTFMEK 136
            |:..||..:   |..|...|      ||..|..:....|.|:.:      ...|..|.|....||
 Worm   119 PNLHEDIPVFQGQGKDRANP------NPPAALGDEALDPFEKYR------GHEKIKWEDEAAYEK 171

  Fly   137 DAKRVGLGEGGKASTLDDESQRDLEKR-MSL--ENGFNALLSDSISVNRSVPDIRHPLCRKKEYV 198
            :.:|.|.||.||...|.::  :::||. :||  .||:||.:||.||:|||:.||||..|:...|.
 Worm   172 EKRREGPGEWGKPVKLPED--KEVEKEALSLYKANGYNAYISDMISLNRSIKDIRHKECKNMMYS 234

  Fly   199 AKLPTVSVIIIFYNEYLSVLMRSVHSLINRSPPELMKEIILVDDHSDREYLGKELETYI----AE 259
            |||||||||..|:.|:.|.|:|||:|:||||||||:||||||||.|::..|.:.||.::    .:
 Worm   235 AKLPTVSVIFPFHEEHNSTLLRSVYSVINRSPPELLKEIILVDDFSEKPALRQPLEDFLKKNKID 299

  Fly   260 HFKWVRVVRLPRRTGLIGARAAGARNATAEVLIFLDSHVEANYNWLPPLLEPIALNKRTAVCPFI 324
            |.  |:|:|..:|.|||..|..||::||.|:|||||:|.|||||||||||:|||.:.||.||||:
 Worm   300 HI--VKVLRTKKREGLIRGRQLGAQDATGEILIFLDAHSEANYNWLPPLLDPIAEDYRTVVCPFV 362

  Fly   325 DVIDHTNFHYRAQDEGARGAFDWEFFYKRLPLLPEDLKHPADPFKSPIMAGGLFAISREFFWELG 389
            ||||...:..|.|||||||:|||.|.||||||..:|.:.|..||.||:||||.||||.::|||||
 Worm   363 DVIDCETYEVRPQDEGARGSFDWAFNYKRLPLTKKDRESPTKPFNSPVMAGGYFAISAKWFWELG 427

  Fly   390 GYDEGLDIWGGEQYELSFKIWMCGGEMYDAPCSRIGHIYRGPRNHQPSPRKGDYLHKNYKRVAEV 454
            |||||||||||||||||||:|.|.|.|.||||||:.||||.......:...||::.:||||||||
 Worm   428 GYDEGLDIWGGEQYELSFKVWQCHGRMVDAPCSRVAHIYRCKYAPFKNAGMGDFVSRNYKRVAEV 492

  Fly   455 WMDEYKNYLYSHGDGLYESVDPGDLTEQKAIRTKLNCKSFKWFMEEVAFDLMKTYPPVDPPSYAM 519
            |||:||..||.|..|: .:.|.|||...|.||.||.||||.|||:|:|||..|.||.|:|.:.|.
 Worm   493 WMDDYKETLYKHRPGV-GNADAGDLKLMKGIREKLQCKSFDWFMKEIAFDQDKYYPAVEPKASAE 556

  Fly   520 GALQNVGNQNLCLDTLGRKKHNKMGMYACADNIKTPQRTQFWELSWKRDLRLRRKKECLDVQIWD 584
            |.::|||. |.|:||..::::.:.|:..|..:.|.....|...|:...|:|.:.:|.|.|.....
 Worm   557 GEIRNVGT-NFCIDTQFKEQNQRFGLRKCTSDDKDGGGEQDLRLTRWHDIRPKGRKICFDCSTSV 620

  Fly   585 ANAPVWLWDCHSQGGNQYWYYDYRHKQLKHGTEGRRCLELLPFSQE-----VVANKCDTDNRFQQ 644
            ..|||.|:||||..|||.:.|....||:.|...| :||.    :.|     :...|||:.:..|:
 Worm   621 DKAPVILFDCHSMKGNQLFKYRVAQKQIYHPISG-QCLT----ADENGKGFLHMKKCDSSSDLQK 680

  Fly   645 WNFGSFNKTALD 656
            |.:.:.:...|:
 Worm   681 WAWQTVDNELLE 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant6NP_001261342.1 BcsA 199..>413 CDD:224136 138/217 (64%)
pp-GalNAc-T 205..502 CDD:133004 181/300 (60%)
RICIN 520..647 CDD:238092 42/131 (32%)
Ricin_B_lectin 520..645 CDD:279046 41/129 (32%)
gly-10NP_001041036.2 pp-GalNAc-T 241..539 CDD:133004 181/300 (60%)
Ricin_B_lectin 555..681 CDD:279046 42/131 (32%)
RICIN 557..681 CDD:238092 41/129 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166016
Domainoid 1 1.000 222 1.000 Domainoid score I1489
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H14924
Inparanoid 1 1.050 513 1.000 Inparanoid score I706
Isobase 1 0.950 - 0 Normalized mean entropy S3364
OMA 1 1.010 - - QHG48703
OrthoDB 1 1.010 - - D144590at33208
OrthoFinder 1 1.000 - - FOG0001284
OrthoInspector 1 1.000 - - otm14307
orthoMCL 1 0.900 - - OOG6_104854
Panther 1 1.100 - - LDO PTHR11675
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2546
SonicParanoid 1 1.000 - - X1309
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1615.890

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