DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant6 and gly-3

DIOPT Version :10

Sequence 1:NP_647749.2 Gene:Pgant6 / 38346 FlyBaseID:FBgn0035375 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_498722.1 Gene:gly-3 / 176112 WormBaseID:WBGene00001628 Length:612 Species:Caenorhabditis elegans


Alignment Length:605 Identity:207/605 - (34%)
Similarity:313/605 - (51%) Gaps:52/605 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 EPQKPQEPDFEEDPEL----QKIDEPEPVEEEVDNP--HPADDEPQQQPQEELQMAAPADASVKK 126
            :|...|:..|.||..:    ::|:...|..:...:|  ||.      ||:::.:...|.|.....
 Worm    35 DPSTSQQQPFPEDNRILNRARRIEPLPPAAQHDSDPDAHPI------QPEKQEKQVYPVDKETAN 93

  Fly   127 DWHDYTFMEKDAKRVGL-GEGGKASTLDDESQRDLEKRMSLENGFNALLSDSISVNRSVPDIRHP 190
            ...  ..||..|...|. |:||...|:.::.:...|||. |||.||.:.|:.|||||::||.|..
 Worm    94 QLR--KLMETQAFGPGYHGQGGTGVTVPEDKKTIKEKRF-LENQFNVVASEMISVNRTLPDYRSD 155

  Fly   191 LCR---KKEYVAKLPTVSVIIIFYNEYLSVLMRSVHSLINRSPPELMKEIILVDDHSDREYLGKE 252
            .||   .....|.:|..|:||:|:||..:.|:|::||:|||||..|::|||||||.|||:||.|.
 Worm   156 ACRTSGNNLKTAGMPKTSIIIVFHNEAWTTLLRTLHSVINRSPRHLLEEIILVDDKSDRDYLVKP 220

  Fly   253 LETYIAEHFKWVRVVRLPRRTGLIGARAAGARNATAEVLIFLDSHVEANYNWLPPLLEPIALNKR 317
            |::||......:.:|.|..|:|||.||..|:..|..::|:|||:|||....||.||:..:|.:::
 Worm   221 LDSYIKMFPIPIHLVHLENRSGLIRARLTGSEMAKGKILLFLDAHVEVTDGWLEPLVSRVAEDRK 285

  Fly   318 TAVCPFIDVIDHTNFHYRAQDEGARGAFDWEFFYKRLPLLPEDLKHPAD----PFKSPIMAGGLF 378
            ..|.|.||||....|.|....|...|.|:|...::...:...:|.....    |.::|.:|||||
 Worm   286 RVVAPIIDVISDDTFEYVTASETTWGGFNWHLNFRWYAVPKRELNRRGSDRSMPIQTPTIAGGLF 350

  Fly   379 AISREFFWELGGYDEGLDIWGGEQYELSFKIWMCGGEMYDAPCSRIGHIYRGPRNHQPSPRKGDY 443
            ||.::||:::|.||||:.:||||..|:||::|||||.:...||||:||::|....:.........
 Worm   351 AIDKQFFYDIGSYDEGMQVWGGENLEISFRVWMCGGSLEIHPCSRVGHVFRKQTPYTFPGGTAKV 415

  Fly   444 LHKNYKRVAEVWMDEYKNYLYSHGDGLYESVDPGDLTEQKAIRTKLNCKSFKWFMEEVAFDLMKT 508
            :|.|..|.|||||||||.:.|...... .:|:.||::|:|.:|..|.||||||::|.:       
 Worm   416 IHHNAARTAEVWMDEYKAFFYKMVPAA-RNVEAGDVSERKKLRETLQCKSFKWYLENI------- 472

  Fly   509 YP--PVDPPSYAMGALQNVGNQNLCLDTLGRKKHNKMGMYAC---ADNIKTPQRTQFWELSWKRD 568
            ||  |:.....::||:.|...:. |:||.|:|.....|:.||   ..|       |.|.|:.|.:
 Worm   473 YPEAPLPADFRSLGAIVNRFTEK-CVDTNGKKDGQAPGIQACHGAGGN-------QAWSLTGKGE 529

  Fly   569 LRLRRKKECLDV-QIWDANAPVWLWDCHSQGGN--QYWYYDYRHKQLKHGTEGRRCLELLPFSQE 630
              :|....||.. .::...:.:.|..|.....|  ..:.:|.:...|.|...| :|  :....|.
 Worm   530 --IRSDDLCLSSGHVYQIGSELKLERCSVSKINVKHVFVFDDQAGTLLHKKTG-KC--VTGADQR 589

  Fly   631 VVANKCDTDNRFQQWNFGSF 650
            |..::|....:.|.|....:
 Worm   590 VTLDECGLGRKDQMWQLEGY 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant6NP_647749.2 pp-GalNAc-T 205..502 CDD:133004 129/300 (43%)
beta-trefoil_Ricin_Pgant9-like 515..648 CDD:467340 32/138 (23%)
gly-3NP_498722.1 pp-GalNAc-T 173..473 CDD:133004 129/307 (42%)
beta-trefoil_Ricin_GALNT1-like 481..608 CDD:467311 32/139 (23%)

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