DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant6 and Galnt10

DIOPT Version :9

Sequence 1:NP_001261342.1 Gene:Pgant6 / 38346 FlyBaseID:FBgn0035375 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_598950.2 Gene:Galnt10 / 171212 MGIID:1890480 Length:603 Species:Mus musculus


Alignment Length:581 Identity:282/581 - (48%)
Similarity:359/581 - (61%) Gaps:58/581 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 AAPADASVK------------------KDWHDYTFMEKDAKRVGLGEGGKASTLDDESQRDLEKR 163
            ||.|.|:|:                  ||||:...:.:||:|||.||.||...:.|..:.|...|
Mouse    45 AAVAPAAVQELHSRQKKTFFLGAEQRLKDWHNKEAIRRDAQRVGYGEQGKPYPMTDAERVDQAYR 109

  Fly   164 MSLENGFNALLSDSISVNRSVPDIRHPLCRKKEYVAKLPTVSVIIIFYNEYLSVLMRSVHSLINR 228
               |||||..:||.||:|||:||||||.|..|.|:..||..|:||.|:||..|.|:|:|||::||
Mouse   110 ---ENGFNIYVSDKISLNRSLPDIRHPNCNSKLYLETLPNTSIIIPFHNEGWSSLLRTVHSVLNR 171

  Fly   229 SPPELMKEIILVDDHSDREYLGKELETYIAEHFKWVRVVRLPRRTGLIGARAAGARNATAEVLIF 293
            |||||:.||:||||.||||:|.|.||.|:| .|..||::|..:|.|||..|..||..||.:|:.|
Mouse   172 SPPELVAEIVLVDDFSDREHLKKPLEDYMA-LFPSVRILRTKKREGLIRTRMLGASAATGDVVTF 235

  Fly   294 LDSHVEANYNWLPPLLEPIALNKRTAVCPFIDVIDHTNFHYRAQ-DEGARGAFDWEFFYKRLPLL 357
            ||||.|||.|||||||:.||.|::|.|||.||||||.:|.|..| .:..|||||||.:|||:|:.
Mouse   236 LDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIP 300

  Fly   358 PEDLK-HPADPFKSPIMAGGLFAISREFFWELGGYDEGLDIWGGEQYELSFKIWMCGGEMYDAPC 421
            ||..| .|:|||:||:|||||||:.|::||||||||.||:||||||||:|||:|||||.|.|.||
Mouse   301 PELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPC 365

  Fly   422 SRIGHIYRGPRNHQPSPRK---GDYLHKNYKRVAEVWMDEYKNYLYSHGDGLYESVDPGDLTEQK 483
            ||:|||||     :..|.|   |..|.:|.|||||||||||..|:|..... |..:..||:..||
Mouse   366 SRVGHIYR-----KYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQRRPE-YRHLSAGDVVAQK 424

  Fly   484 AIRTKLNCKSFKWFMEEVAFDLMKTYPPVDPPSYAMGALQNVGNQNLCLDTLGRKKHNKMGMYAC 548
            .:|..||||||||||.::|:||.|.||||:||:.|.|.::|||. .||.||       |:|....
Mouse   425 KLRVSLNCKSFKWFMTKIAWDLPKFYPPVEPPAAAWGEIRNVGT-GLCTDT-------KLGTLGS 481

  Fly   549 ADNIKTPQR---------TQFWELSWKRDLR----LRRKKECLDVQIWDANAPVWLWDCHSQGGN 600
            ...::|..|         .|.:..:|:.|:|    ...||.|.|..  ...:||.|:||||..||
Mouse   482 PLRLETCIRGRGEAAWNSMQVFTFTWREDIRPGDPQHTKKFCFDAV--SHTSPVTLYDCHSMKGN 544

  Fly   601 QYWYYDYRHKQLKHGTEGRRCLELLPFSQEVVANKCDTDNRFQQWNFGSFNKTALDNYSQD 661
            |.|.| .:.|.|.|...| .|::.......|..|.|:..:..|||.|...|.|.|:|::::
Mouse   545 QLWKY-RKDKTLYHPVSG-SCMDCSESDHRVFMNTCNPSSLTQQWLFEHTNSTVLENFNKN 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant6NP_001261342.1 BcsA 199..>413 CDD:224136 133/215 (62%)
pp-GalNAc-T 205..502 CDD:133004 179/301 (59%)
RICIN 520..647 CDD:238092 43/139 (31%)
Ricin_B_lectin 520..645 CDD:279046 41/137 (30%)
Galnt10NP_598950.2 WcaA 144..443 CDD:223539 181/305 (59%)
Catalytic subdomain A 144..253 66/109 (61%)
pp-GalNAc-T 148..443 CDD:133004 179/301 (59%)
Catalytic subdomain B 311..373 47/61 (77%)
Flexible loop. /evidence=ECO:0000250 373..384 3/15 (20%)
Ricin_B_lectin 459..587 CDD:279046 42/139 (30%)
RICIN 461..589 CDD:238092 43/139 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 223 1.000 Domainoid score I2564
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H14924
Inparanoid 1 1.050 515 1.000 Inparanoid score I1279
Isobase 1 0.950 - 0 Normalized mean entropy S3364
OMA 1 1.010 - - QHG48703
OrthoDB 1 1.010 - - D144590at33208
OrthoFinder 1 1.000 - - FOG0001284
OrthoInspector 1 1.000 - - mtm8888
orthoMCL 1 0.900 - - OOG6_104854
Panther 1 1.100 - - LDO PTHR11675
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2546
SonicParanoid 1 1.000 - - X1309
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.820

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