DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant6 and Galnt3

DIOPT Version :10

Sequence 1:NP_647749.2 Gene:Pgant6 / 38346 FlyBaseID:FBgn0035375 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_056551.2 Gene:Galnt3 / 14425 MGIID:894695 Length:633 Species:Mus musculus


Alignment Length:692 Identity:227/692 - (32%)
Similarity:330/692 - (47%) Gaps:135/692 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 WIVKASLLLLISLTLFVLITSWISSTPYT-------------NKPVHHGVEPVPEKAGLSGDVKV 59
            |  |...::...|.:.:|:...: |..|:             ||.:...:|.|       .::|.
Mouse    21 W--KLGAVIFFFLVVLILMQREV-SVQYSKEESKMERNLKNKNKMLDFMLEAV-------NNIKD 75

  Fly    60 KVPAIKQPEPQKPQEPDFEEDPELQKIDEPEPVEEEVDNPHPADDEPQQQPQEELQMAAPADASV 124
            .:|.::...|.| :..|..|.|.||.......::...|.|          ||:.   .||..:  
Mouse    76 AMPKMQIGAPIK-ENIDVRERPCLQGYYTAAELKPVFDRP----------PQDS---NAPGAS-- 124

  Fly   125 KKDWHDYTFMEKDAKRVGLGEGGKASTLDDESQRDLEKRMSLENGFNALLSDSISVNRSV-PDIR 188
                               |:..|.:.|..|.|::.| |...::.|||..||.||::|.: ||.|
Mouse   125 -------------------GKPFKITHLSPEEQKEKE-RGETKHCFNAFASDRISLHRDLGPDTR 169

  Fly   189 HPLCRKKEY--VAKLPTVSVIIIFYNEYLSVLMRSVHSLINRSPPELMKEIILVDDHSDREYLGK 251
            .|.|.::::  ...|||.||||:|:||..|.|:|:|||::..||..|:||||||||.|..:||.:
Mouse   170 PPECIEQKFKRCPPLPTTSVIIVFHNEAWSTLLRTVHSVLYSSPAILLKEIILVDDASVDDYLHE 234

  Fly   252 ELETYIAEHFKWVRVVRLPRRTGLIGARAAGARNATAEVLIFLDSHVEANYNWLPPLLEPIALNK 316
            :||.|| :.|..|::||...|.|||.||..||..||||.|.|||:|.|..|.||.|||..||.|.
Mouse   235 KLEEYI-KQFSIVKIVRQQERKGLITARLLGAAVATAETLTFLDAHCECFYGWLEPLLARIAENY 298

  Fly   317 RTAVCPFIDVIDHTNFHY-RAQDEGA---RGAFDW--EFFYKRLPLLPEDLKHPAD---PFKSPI 372
            ...|.|.|..||...|.: :....|:   ||.|||  .|.::.||  ..:.:...|   |.|:|.
Mouse   299 TAVVSPDIASIDLNTFEFNKPSPYGSNHNRGNFDWSLSFGWESLP--DHEKQRRKDETYPIKTPT 361

  Fly   373 MAGGLFAISREFFWELGGYDEGLDIWGGEQYELSFKIWMCGGEMYDAPCSRIGHIYRGPRNHQPS 437
            .|||||:||:::|..:|.|||.::|||||..|:||::|.|||::...|||.:||::|....| ..
Mouse   362 FAGGLFSISKKYFEHIGSYDEEMEIWGGENIEMSFRVWQCGGQLEIMPCSVVGHVFRSKSPH-TF 425

  Fly   438 PRKGDYLHKNYKRVAEVWMDEYKNYLYSHGDGLYESVDP---GDLTEQKAIRTKLNCKSFKWFME 499
            |:....:.:|..|:|||||||||...|.......:.|..   |||:::..|:.:|.||:|.|::.
Mouse   426 PKGTQVIARNQVRLAEVWMDEYKEIFYRRNTDAAKIVKQKSFGDLSKRFEIKKRLQCKNFTWYLN 490

  Fly   500 EVAFDLMKTYPPVDPPS---YAMGALQNVGNQNLCLDTLGRKKHNKMG----MYAC---ADNIKT 554
            .:       ||....|.   ...|.:::|| |.||||.   .::|:.|    :|.|   ..|   
Mouse   491 TI-------YPEAYVPDLNPVISGYIKSVG-QPLCLDV---GENNQGGKPLILYTCHGLGGN--- 541

  Fly   555 PQRTQFWELSWKRDLRLRRKKE-CLDVQIWDANAPVWLWDCHSQG------GNQYWYYDYRHKQL 612
                |::|.|.:|::|...:|| ||..    ....|.|..|..:|      |.|.|  :.|..||
Mouse   542 ----QYFEYSAQREIRHNIQKELCLHA----TQGVVQLKACVYKGHRTIAPGEQIW--EIRKDQL 596

  Fly   613 KHGTEGRRCL-------ELLPFSQEVVANKCDTDNRFQQWNF 647
            .:....:.||       .|:|         ||..:..|:|.|
Mouse   597 LYNPLFKMCLSSNGEHPNLVP---------CDATDLLQKWIF 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant6NP_647749.2 pp-GalNAc-T 205..502 CDD:133004 135/308 (44%)
beta-trefoil_Ricin_Pgant9-like 515..648 CDD:467340 42/157 (27%)
Galnt3NP_056551.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 112..145 13/67 (19%)
Catalytic subdomain A 184..293 62/109 (57%)
pp-GalNAc-T 188..493 CDD:133004 135/315 (43%)
Catalytic subdomain B 356..418 32/61 (52%)
beta-trefoil_Ricin-like 502..630 CDD:483949 41/154 (27%)

Return to query results.
Submit another query.