DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant6 and Galnt2

DIOPT Version :9

Sequence 1:NP_001261342.1 Gene:Pgant6 / 38346 FlyBaseID:FBgn0035375 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_644678.2 Gene:Galnt2 / 108148 MGIID:894694 Length:570 Species:Mus musculus


Alignment Length:575 Identity:199/575 - (34%)
Similarity:281/575 - (48%) Gaps:87/575 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 AAPADASVKKDWHDYTFMEK--------DAKRVGLG--EGGKASTLDDESQRDLEKRM------- 164
            |....|..|.||:|...::|        |.|..|:.  ..||....|...:..:...|       
Mouse    33 AGGGGAGRKGDWNDIDSIKKKDLHHSRGDEKAQGVETLPPGKVRWPDFNQEAYVGGTMVRSGQDP 97

  Fly   165 SLENGFNALLSDSISVNRSVPDIRHPLCRKKEYVAKLPTVSVIIIFYNEYLSVLMRSVHSLINRS 229
            ...|.||.:.||.:.::|.:||.||..|::|::...||..||:|.|:||..|.|:|:|.|::.||
Mouse    98 YARNKFNQVESDKLHMDRGIPDTRHDQCQRKQWRVDLPATSVVITFHNEARSALLRTVVSVLKRS 162

  Fly   230 PPELMKEIILVDDHS----DREYLGKELETYIAEHFKWVRVVRLPRRTGLIGARAAGARNATAEV 290
            ||.|:||||||||:|    |...|||         .:.|||:|..||.||:.:|..||..|.|:|
Mouse   163 PPHLIKEIILVDDYSNDPEDGALLGK---------IEKVRVLRNDRREGLMRSRVRGADAAQAKV 218

  Fly   291 LIFLDSHVEANYNWLPPLLEPIALNKRTAVCPFIDVIDHTNFHYRAQDEGARGAFDWEFFYKRLP 355
            |.|||||.|.|..||.||||.:|.::...|.|.||||:..||.|.......:|.|||...:|...
Mouse   219 LTFLDSHCECNERWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDY 283

  Fly   356 LLPEDLK----HPADPFKSPIMAGGLFAISREFFWELGGYDEGLDIWGGEQYELSFKIWMCGGEM 416
            :.||..:    :|..|.|:|::|||||.:.:.:|.|||.||..:|:||||..|:||::|.|||.:
Mouse   284 MTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKLYFEELGKYDMMMDVWGGENLEISFRVWQCGGSL 348

  Fly   417 YDAPCSRIGHIYRGPRNHQPSPRKGDYLHKNYKRVAEVWMDEYKNYLYSHGDGLYESVDPGDLTE 481
            ...||||:||::|....:......|....:|.:|.|||||||||::.|:..... .:|..|::..
Mouse   349 EIIPCSRVGHVFRKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKHFYYAAVPSA-RNVPYGNIQS 412

  Fly   482 QKAIRTKLNCKSFKWFMEEVAFDLMKTYPPVDPPSY---AMGALQNVGNQNLCLDTLGRKKHNKM 543
            :..:|.||.||.|||:::.|       ||.:..|.:   |.||||...|   ||||||......:
Mouse   413 RLELRKKLGCKPFKWYLDNV-------YPELRVPDHQDIAFGALQQGTN---CLDTLGHFADGVV 467

  Fly   544 GMYACADNIKTPQRTQFWELSWKRDLRLRRKKECLDVQIWDANAPVWLWDCHSQGGNQYWYYDYR 608
            |:|.|    ......|.|.|:  ::..::....||.|......:.:.|..|......|.|.....
Mouse   468 GIYEC----HNAGGNQEWALT--KEKSVKHMDLCLTVVDRSPGSLIRLQGCRENDSRQKWEQIEG 526

  Fly   609 HKQLKHGTEGRRCLELLPFSQEVVANKCDTDNR----------------FQQWNF 647
            :.:|:|                |.:|.| .|:|                .|||.|
Mouse   527 NSKLRH----------------VGSNLC-LDSRTAKSGGLSVEVCGPALSQQWKF 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant6NP_001261342.1 BcsA 199..>413 CDD:224136 100/221 (45%)
pp-GalNAc-T 205..502 CDD:133004 131/304 (43%)
RICIN 520..647 CDD:238092 34/142 (24%)
Ricin_B_lectin 520..645 CDD:279046 32/140 (23%)
Galnt2NP_644678.2 Catalytic subdomain A 134..239 58/113 (51%)
pp-GalNAc-T 138..433 CDD:133004 132/311 (42%)
Catalytic subdomain B 299..361 32/61 (52%)
Ricin_B_lectin 445..562 CDD:279046 33/142 (23%)
RICIN 455..564 CDD:238092 29/131 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.