DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant6 and POC1B-GALNT4

DIOPT Version :9

Sequence 1:NP_001261342.1 Gene:Pgant6 / 38346 FlyBaseID:FBgn0035375 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001186710.1 Gene:POC1B-GALNT4 / 100528030 HGNCID:42957 Length:575 Species:Homo sapiens


Alignment Length:535 Identity:198/535 - (37%)
Similarity:283/535 - (52%) Gaps:80/535 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 ASVKKDWHDYT---FMEKDAKRVGLGEGGKASTL---DDE--SQRDLEKRMSLENGFNALLSDSI 178
            :.::|:..|.:   :.:..|....|||.||||.|   :||  .|.:|.:|.::    |..|||.|
Human    47 SDLQKNTEDLSRPLYKKPPADSRALGEWGKASKLQLNEDELKQQEELIERYAI----NIYLSDRI 107

  Fly   179 SVNRSVPDIRHPLCRKKEY-VAKLPTVSVIIIFYNEYLSVLMRSVHSLINRSPPELMKEIILVDD 242
            |::|.:.|.|...|:.::: ...|||.||||.||||..|.|:|::||::..||..|:||||||||
Human   108 SLHRHIEDKRMYECKSQKFNYRTLPTTSVIIAFYNEAWSTLLRTIHSVLETSPAVLLKEIILVDD 172

  Fly   243 HSDREYLGKELETYIAEHFKWVRVVRLPRRTGLIGARAAGARNATAEVLIFLDSHVEANYNWLPP 307
            .|||.||..:|||||: :...||::|..:|.||:.||..||..||.:||.|||.|.|.|..||.|
Human   173 LSDRVYLKTQLETYIS-NLDRVRLIRTNKREGLVRARLIGATFATGDVLTFLDCHCECNSGWLEP 236

  Fly   308 LLEPIALNKRTAVCPFIDVIDHTNFHYRAQ-DEGARGAFDWE--FFYKRLPLLPEDLK-HPADPF 368
            |||.|..::...|||.||.||...|.:..| .|...|.|||.  |.:..:|....|.: ...||.
Human   237 LLERIGRDETAVVCPVIDTIDWNTFEFYMQIGEPMIGGFDWRLTFQWHSVPKQERDRRISRIDPI 301

  Fly   369 KSPIMAGGLFAISREFFWELGGYDEGLDIWGGEQYELSFKIWMCGGEMYDAPCSRIGHIYRGPRN 433
            :||.|||||||:|:::|..||.||.|:::||||..||||::|.|||::...|||.:||::     
Human   302 RSPTMAGGLFAVSKKYFQYLGTYDTGMEVWGGENLELSFRVWQCGGKLEIHPCSHVGHVF----- 361

  Fly   434 HQPSPRKGDYLHKNY----KRVAEVWMDEYKNYLYSHGDGLYESVDPGDLTEQKAIRTKLNCKSF 494
                |::..|...|:    .|.|||||||||.:.|:......:.. .||::|:|.:|.:|.||||
Human   362 ----PKRAPYARPNFLQNTARAAEVWMDEYKEHFYNRNPPARKEA-YGDISERKLLRERLRCKSF 421

  Fly   495 KWFMEEVAFDLMKTYPPVDPPSYAMGALQNVGNQNLCLDTLGRKKHNKMGMYACADNIKTPQRTQ 559
            .|:::.|..:|   :.|.|.|.: .||:::.|..:.|||            |...||..|     
Human   422 DWYLKNVFPNL---HVPEDRPGW-HGAIRSRGISSECLD------------YNSPDNNPT----- 465

  Fly   560 FWELSWKRDLRLRRKKECLDVQIWDANAPVWLWDCHSQGGNQYWYYDYRHKQLKHGTEGRRCLEL 624
                                      .|.:.|:.||.|||||::.|. .:|:::..:....|.|:
Human   466 --------------------------GANLSLFGCHGQGGNQFFEYT-SNKEIRFNSVTELCAEV 503

  Fly   625 LPFSQEVVANKCDTD 639
            ......|....|..|
Human   504 PEQKNYVGMQNCPKD 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant6NP_001261342.1 BcsA 199..>413 CDD:224136 108/217 (50%)
pp-GalNAc-T 205..502 CDD:133004 138/304 (45%)
RICIN 520..647 CDD:238092 26/120 (22%)
Ricin_B_lectin 520..645 CDD:279046 26/120 (22%)
POC1B-GALNT4NP_001186710.1 WcaA 131..427 CDD:223539 141/306 (46%)
pp-GalNAc-T 135..429 CDD:133004 138/304 (45%)
RICIN 443..573 CDD:238092 26/120 (22%)
Ricin_B_lectin 443..571 CDD:279046 26/120 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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