DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant6 and galntl6

DIOPT Version :9

Sequence 1:NP_001261342.1 Gene:Pgant6 / 38346 FlyBaseID:FBgn0035375 Length:666 Species:Drosophila melanogaster
Sequence 2:XP_031751315.1 Gene:galntl6 / 100487935 XenbaseID:XB-GENE-6042467 Length:600 Species:Xenopus tropicalis


Alignment Length:573 Identity:274/573 - (47%)
Similarity:360/573 - (62%) Gaps:34/573 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 ADDEPQQQPQEELQMAAPADASVKKDWHDYTFMEKDAKRVGLGEGGKASTLDDESQRDLEKRMSL 166
            |.|:|......|.|:....|...:||||||..::|:|.|.|.||.||...|.:|.|.|...|   
 Frog    42 AGDQPFSLGVSEAQLYTWTDGLRRKDWHDYESIQKEALRSGKGEHGKPYPLTEEEQDDTVYR--- 103

  Fly   167 ENGFNALLSDSISVNRSVPDIRHPLCRKKEYVAKLPTVSVIIIFYNEYLSVLMRSVHSLINRSPP 231
            |||||..:|:.|::.||:||||||.|:.|.|:.:||..|:||.|:||..:.|:|::||:|||:|.
 Frog   104 ENGFNIFVSNKIALARSLPDIRHPNCKHKLYLERLPNTSIIIPFHNEGWTSLLRTIHSVINRTPD 168

  Fly   232 ELMKEIILVDDHSDREYLGKELETYIAEHFKWVRVVRLPRRTGLIGARAAGARNATAEVLIFLDS 296
            .|::|:|||||.||||:|.::||.|:| ::..||:||..:|.|||..|..||..|..|||.||||
 Frog   169 SLIEEMILVDDFSDREHLREKLEEYMA-YYPKVRIVRTKKREGLIRTRLLGASMAKGEVLTFLDS 232

  Fly   297 HVEANYNWLPPLLEPIALNKRTAVCPFIDVIDHTNFHYRAQ-DEGARGAFDWEFFYKRLPLLPE- 359
            |.|.|.|||||||..||||.:|.|||.||||||.:|.|.|| .:..|||||||.:|||:|:.|| 
 Frog   233 HCEVNVNWLPPLLNQIALNHKTIVCPMIDVIDHNHFGYEAQAGDAMRGAFDWEMYYKRIPIPPEL 297

  Fly   360 DLKHPADPFKSPIMAGGLFAISREFFWELGGYDEGLDIWGGEQYELSFKIWMCGGEMYDAPCSRI 424
            ....|::||:||:|||||||:.|::||||||||.||:||||||||||||:|||||||:|.||||:
 Frog   298 QRTDPSEPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYELSFKVWMCGGEMFDVPCSRV 362

  Fly   425 GHIYRGPRNHQPSPRK---GDYLHKNYKRVAEVWMDEYKNYLYSHGDGLYESVDPGDLTEQKAIR 486
            |||||     :..|.|   |..|.:|.|||||.|||||..|:|..... |..:..||::.||.:|
 Frog   363 GHIYR-----KYVPYKVPTGTSLARNLKRVAETWMDEYAEYIYQRRPE-YRHLSTGDISSQKELR 421

  Fly   487 TKLNCKSFKWFMEEVAFDLMKTYPPVDPPSYAMGALQNVGNQNLCLDTLGRKKHNKMGMYACADN 551
            ..|.||.|||:|.|||:|:.|.||||:||..:.|.::||.: |||:|:    ||...|.....|.
 Frog   422 KHLKCKDFKWYMSEVAWDVPKFYPPVEPPPASWGEIRNVAS-NLCIDS----KHGATGTELRLDT 481

  Fly   552 I------KTPQRTQFWELSWKRDLR----LRRKKECLDVQIWDANAPVWLWDCHSQGGNQYWYYD 606
            .      :|....|.:...|:.|:|    |..:|.|.|  ....::||.|:|||...|||.|.| 
 Frog   482 CVKDGSERTWSHEQLFTFGWREDIRPGEPLHTRKFCFD--SISHSSPVTLYDCHGMKGNQQWSY- 543

  Fly   607 YRHKQLKHGTEGRRCLELLPFSQEVVANKCDTDNRFQQWNFGSFNKTALDNYS 659
            .:.|.|.|... ..|::..|..:::..|:||..:..|||.|...|.|.|..::
 Frog   544 RKDKTLFHPVT-NSCIDCNPAEKKLFMNRCDPLSETQQWIFEHVNMTILQKFN 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant6NP_001261342.1 BcsA 199..>413 CDD:224136 129/215 (60%)
pp-GalNAc-T 205..502 CDD:133004 173/301 (57%)
RICIN 520..647 CDD:238092 42/136 (31%)
Ricin_B_lectin 520..645 CDD:279046 40/134 (30%)
galntl6XP_031751315.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D144590at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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