DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant6 and LOC100486078

DIOPT Version :10

Sequence 1:NP_647749.2 Gene:Pgant6 / 38346 FlyBaseID:FBgn0035375 Length:666 Species:Drosophila melanogaster
Sequence 2:XP_002945237.1 Gene:LOC100486078 / 100486078 XenbaseID:XB-GENE-29078163 Length:139 Species:Xenopus tropicalis


Alignment Length:136 Identity:44/136 - (32%)
Similarity:60/136 - (44%) Gaps:16/136 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   539 KHNKMG----MYAC--ADNIKTPQRTQFWELSWKRDLR----LRRKKECLDVQIWDANAPVWLWD 593
            ||...|    :.||  ..|..|....|.:.|.|:.|:|    ....|.|.|..  ...:||.|:|
 Frog     8 KHVTSGTEIRLEACNKGRNSDTWGARQVFTLGWREDIRPGIPQHTMKSCFDAV--SQTSPVTLFD 70

  Fly   594 CHSQGGNQYWYYDYRHKQLKHGTEGRRCLELLPFSQEVVANKCDTDNRFQQWNFGSFNKTALD-- 656
            ||...|||.|.| .|.|.:.|.| ...|::......::..|||:..:..|||.|...|.|.|:  
 Frog    71 CHGMKGNQLWKY-RRDKTVYHPT-SNSCMDCNEGEYKIFMNKCNPSSPTQQWTFEHINSTILEAF 133

  Fly   657 NYSQDL 662
            |.::||
 Frog   134 NRNKDL 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant6NP_647749.2 pp-GalNAc-T 205..502 CDD:133004
beta-trefoil_Ricin_Pgant9-like 515..648 CDD:467340 37/118 (31%)
LOC100486078XP_002945237.1 beta-trefoil_Ricin-like 3..136 CDD:483949 42/131 (32%)
Blue background indicates that the domain is not in the aligned region.

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