DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant6 and galnt3

DIOPT Version :9

Sequence 1:NP_001261342.1 Gene:Pgant6 / 38346 FlyBaseID:FBgn0035375 Length:666 Species:Drosophila melanogaster
Sequence 2:XP_021334717.1 Gene:galnt3 / 100331984 ZFINID:ZDB-GENE-120313-1 Length:625 Species:Danio rerio


Alignment Length:690 Identity:223/690 - (32%)
Similarity:337/690 - (48%) Gaps:132/690 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VKASLLLLISLT-LFVLITSWISSTPYTNKPVHHGVEPVPEKAGLSGDV--------------KV 59
            :|.:::.|:.:| ||::....:|.:| .::|...|:  |.::.|:.|.|              ::
Zfish    15 LKLAIVALVFVTFLFLMQREVVSQSP-QDEPWLRGI--VEKRDGVLGMVMGAVNNFRDAMPKMQI 76

  Fly    60 KVPAIKQPEPQKPQE--PDFEEDPELQKIDEPEPVEEEVDNPHPADDEPQQQPQEELQMAAPADA 122
            |.| ::|.|.|....  ..:....||:                |..:.|.|.|      :||   
Zfish    77 KAP-VRQQESQGSSACLSGYYTPAELK----------------PVLERPPQNP------SAP--- 115

  Fly   123 SVKKDWHDYTFMEKDAKRVGLGEGGKASTLDD--ESQRDLEKRMSLENGFNALLSDSISVNRSV- 184
                                 |..|||...|:  .|::..::|...::.||...||.||::|.: 
Zfish   116 ---------------------GASGKAFHTDNLSSSEQKEKERGEEKHCFNLYASDRISLSRDLG 159

  Fly   185 PDIRHPLCRKKEY--VAKLPTVSVIIIFYNEYLSVLMRSVHSLINRSPPELMKEIILVDDHSDRE 247
            ||.|.|.|.::.:  ...|||.||||:|:||..|.|:|:|:|:::.||...:||||||||.|..|
Zfish   160 PDTRPPECIEQTFRRCPPLPTTSVIIVFHNEAWSTLLRTVYSVLHTSPALFLKEIILVDDASVDE 224

  Fly   248 YLGKELETYIAE-HFKWVRVVRLPRRTGLIGARAAGARNATAEVLIFLDSHVEANYNWLPPLLEP 311
            :|..:|:.::.: |.  |||||...|.|||.||..||..||.:.|.|||:|.|..:.||.|||..
Zfish   225 HLKDKLDEFLKQLHI--VRVVRQHERKGLITARLLGASVATGDTLTFLDAHCECFHGWLEPLLAR 287

  Fly   312 IALNKRTAVCPFIDVIDHTNFHY-RAQDEGA---RGAFDW--EFFYKRLPLLPEDLKHPAD---P 367
            ||.|....|.|.|..||...|.: :....|.   ||.|||  .|.::.||  ..:.:...|   |
Zfish   288 IAENSSAVVSPDITTIDLNTFEFMKPSPYGQHHNRGNFDWGLSFGWETLP--DHERRRRKDETYP 350

  Fly   368 FKSPIMAGGLFAISREFFWELGGYDEGLDIWGGEQYELSFKIWMCGGEMYDAPCSRIGHIYRGPR 432
            .|:|..|||||:|||::|:.:|.|||.::|||||..|:||::|.|||::...|||.:||::|...
Zfish   351 IKTPTFAGGLFSISRDYFYHIGSYDEEMEIWGGENIEMSFRVWQCGGQLEIIPCSVVGHVFRTKS 415

  Fly   433 NHQPSPRKGDYLHKNYKRVAEVWMDEYKNYLYSHGDGLYESVDP---GDLTEQKAIRTKLNCKSF 494
            .| ..|:....:.:|..|:||||||:||...|.......:....   ||::.:..:|.:|.||||
Zfish   416 PH-TFPKGTQVIARNQVRLAEVWMDDYKEIFYRRNQQAAQIAKEHSFGDVSRRVDLRERLQCKSF 479

  Fly   495 KWFMEEVAFDLMKTYPPVDPPS---YAMGALQNVGNQNLCLDTLGRKKHNKMG----MYAC---A 549
            .|:::.|       ||.|..|.   ...||::|:|.: .|||.   .:.|:.|    ||.|   .
Zfish   480 SWYLKNV-------YPEVFMPDLNPLQFGAIRNMGKE-ACLDV---GESNEGGKPLIMYPCHGMG 533

  Fly   550 DNIKTPQRTQFWELSWKRDLRLRRKKE-CLDVQIWDANAPVWLWDCHSQGGN------QYWYYDY 607
            .|       |::|.|...::|...:|| |||   ....|.|.|.:|..:|.|      |.|  :.
Zfish   534 GN-------QYFEYSTHHEIRHNIQKELCLD---GTDGAMVRLEECQYKGHNTITSPQQKW--EL 586

  Fly   608 RHKQLKHGTEGRRCLELLPFSQEVVANKCDTDNRFQQWNF 647
            |..||.:....::||...|.:..:|  .|:.|:::|.|.|
Zfish   587 REDQLFYNKASKQCLSARPENPSLV--PCNPDDKYQLWLF 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant6NP_001261342.1 BcsA 199..>413 CDD:224136 100/223 (45%)
pp-GalNAc-T 205..502 CDD:133004 128/309 (41%)
RICIN 520..647 CDD:238092 41/140 (29%)
Ricin_B_lectin 520..645 CDD:279046 40/138 (29%)
galnt3XP_021334717.1 pp-GalNAc-T 182..487 CDD:133004 129/316 (41%)
Ricin_B_lectin 500..622 CDD:306998 40/139 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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