DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant6 and galnt18b

DIOPT Version :9

Sequence 1:NP_001261342.1 Gene:Pgant6 / 38346 FlyBaseID:FBgn0035375 Length:666 Species:Drosophila melanogaster
Sequence 2:XP_003199061.1 Gene:galnt18b / 100310831 ZFINID:ZDB-GENE-091014-1 Length:609 Species:Danio rerio


Alignment Length:669 Identity:205/669 - (30%)
Similarity:324/669 - (48%) Gaps:123/669 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IVKASLLLLISLTLFVLITSWISSTPYTNKPVHHGVEPVPEKAGLSGDVKVKVPAIKQPEPQKPQ 73
            ::.:.:..::.|.....:|::|::. |...||     |||.|. |.||.|.:...|         
Zfish    15 VILSGMTNIVCLLYVGWVTNYIANV-YIKVPV-----PVPAKK-LEGDRKGETLRI--------- 63

  Fly    74 EPDFEEDPELQKIDEPEPVEEE--VDNPHPADDEPQQQPQEELQMAAPADASVKKDWHDYTFMEK 136
                     ::::|..|.|..:  .::|...||....:        :.||:|:...|        
Zfish    64 ---------IERLDRLENVVNQHIQESPLKGDDNQVDR--------SFADSSLFNHW-------- 103

  Fly   137 DAKRVGLGEGGKASTLDDESQRDLEKRMSLENGFNALLSDSISVNRSVPDIRHPLCRKKEYVAKL 201
                        ...|..||:| :..:|....|:|..|||.:|::|::||.|...|:...|.:.|
Zfish   104 ------------GQDLGPESRR-VALKMFQYYGYNGYLSDRLSMDRAIPDYRPDGCKNMSYPSNL 155

  Fly   202 PTVSVIIIFYNEYLSVLMRSVHSLINRSPPELMKEIILVDDHSDREYLGKELETYI----AEHFK 262
            |.||::.||.||.|||::||:||::||:|..|:||||||||:|:.:.|.::|:.::    |:...
Zfish   156 PQVSIVFIFVNEALSVILRSIHSVMNRTPSHLLKEIILVDDNSNNDELKEKLQDFVKETNAKQPG 220

  Fly   263 WVRVVRLPRRTGLIGARAAGARNATAEVLIFLDSHVEANYNWLPPLLEPIALNKRTAVCPFIDVI 327
            :::|||..|:.|||.:|.:|.|.|:|.|:...|:|||.|..|..|:|:.|..::...:.|..|.|
Zfish   221 FIKVVRHSRQEGLIRSRVSGWRAASAPVVALFDAHVEFNIGWAEPILQRIKEDRTRIISPSFDNI 285

  Fly   328 DHTNFHYRAQDEGARGAFDWEFF--YKRLPLLPEDLKHPADPFKSPIMAGGLFAISREFFWELGG 390
            .:..|........|:| ||||.:  |...|....:|.:...|.:||.:. |.|.:.|.:|.|:|.
Zfish   286 KYDTFEIEEYPLSAQG-FDWELWCRYLNPPKSWWNLNNSTAPIRSPALI-GCFVVDRLYFAEIGL 348

  Fly   391 YDEGLDIWGGEQYELSFKIWMCGGEMYDAPCSRIGHIYRGPRNHQP-SPRKGDYLHKNYKRVAEV 454
            .|||::|:|||..||..::|.|||.:...||:||.||.|.   |:| :.....::.:|..|||||
Zfish   349 LDEGMEIYGGENVELGVRVWQCGGSVEVLPCARIAHIERA---HKPYTEDLTAHVRRNALRVAEV 410

  Fly   455 WMDEYKNYLYSHGDGLYE--SVDPGDLTEQKAIRTKLNCKSFKWFMEEVAFDLMKTYPPVDPPSY 517
            ||||:|:::|...:...|  .:|.||:.|:||:|.||.||:|:|::..: :..|:.|  .|..:|
Zfish   411 WMDEFKSHVYMAWNIPQEDSGIDIGDIAERKALRKKLQCKTFRWYLVNI-YPEMRMY--TDTVAY 472

  Fly   518 AMGALQNVGNQNLCLDTLGRKKHNKMGMYACADNIKTPQRTQFWE--------LSWKRDLRLRRK 574
              |.|:|....:||||. |....|...:|.|  :..|||...:..        ||...|   ...
Zfish   473 --GVLRNSLKTDLCLDQ-GPDTDNIPILYLC--HGMTPQNVYYTSTQQLFVGILSPTVD---DDD 529

  Fly   575 KECLDVQIWDANAPVWLWDC-------------HSQGGNQYWYYDYRHKQLKHGTEGRRCLELL- 625
            .:||    .|.|....|.:|             .:|||:            ...|:.:|||||: 
Zfish   530 NKCL----VDVNGRPRLIECSYAVAKRMKLHWRFTQGGS------------IQNTKSKRCLELVE 578

  Fly   626 ----PFSQEVVANKCDTDN 640
                .|..::...||...|
Zfish   579 NNDNEFGFQLTLQKCTGQN 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant6NP_001261342.1 BcsA 199..>413 CDD:224136 85/219 (39%)
pp-GalNAc-T 205..502 CDD:133004 120/305 (39%)
RICIN 520..647 CDD:238092 36/147 (24%)
Ricin_B_lectin 520..645 CDD:279046 36/147 (24%)
galnt18bXP_003199061.1 pp-GalNAc-T 159..460 CDD:133004 120/306 (39%)
Glyco_tranf_2_2 160..421 CDD:287123 104/265 (39%)
Ricin_B_lectin 471..598 CDD:279046 37/151 (25%)
RICIN 473..600 CDD:238092 36/147 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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