DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Atg2 and atg2a

DIOPT Version :9

Sequence 1:NP_001261341.1 Gene:Atg2 / 38344 FlyBaseID:FBgn0044452 Length:1906 Species:Drosophila melanogaster
Sequence 2:XP_009306032.1 Gene:atg2a / 101883461 ZFINID:ZDB-GENE-091204-142 Length:2025 Species:Danio rerio


Alignment Length:2182 Identity:619/2182 - (28%)
Similarity:965/2182 - (44%) Gaps:444/2182 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 WFNPWDG-LKTKMCRYLLQRYLGQFFENNLNLEQLKVDLYNGKAVVEDIFLKVNAFNDLFEDQGW 66
            |..||.| :|.:.||||||.|||.|.|..|:|:||.:|||||..|:.:|.|.|.|.|:|.:..|.
Zfish     4 WLFPWSGSIKKRACRYLLQHYLGHFLEERLSLDQLSLDLYNGSGVIREINLDVWAVNELLDSLGA 68

  Fly    67 AFEVVSGHIGRLTVVVPWNALMTNDSSLEIHNLTITLRPVTRYQSGTTMLESMWSS-VSSSMQMA 130
            ..|:|.|.:..:.|.:||.||:|...:|||..|.||.||  :|::..:.....||| ::||||:|
Zfish    69 PLEIVEGFVNSIAVTIPWAALVTEHCTLEITGLQITCRP--KYRTNGSWDSQGWSSCMTSSMQLA 131

  Fly   131 EECMK---QVDDDVPFLNHNNALIGLEKFAETIDNVLNRIRAKLTNTTLNIEYILPRSDRKLVLS 192
            :||:|   :..::.|     ..|.|||.||:||:.||.||:....:|.:.:|:.....:..:.|.
Zfish   132 QECLKDPPEASEEPP-----APLEGLEMFAQTIETVLRRIKVTFLDTIVRVEHHSLDHETGVALE 191

  Fly   193 FQASHVEYKNKTGYEMPMSTSQDTETE-EDPNSSFNALPMIAKHNLVIEGLS-----LHTSEVL- 250
            .:...|:|.:    |....:||....: ..|.:..:.:..:....|:.|.|.     :|..::. 
Zfish   192 MRIKRVDYCD----EAVRDSSQTVPVDIHQPPAFLHKILQLNSVKLLYETLGGSQGVIHPDDMTS 252

  Fly   251 -----------DVMD-----HQFGPTPYEQLCKIVELKGAQNIQINIKQTENIVGPKVSLELSLD 299
                       :|.|     |....||...|  |.:..|.....:.:||.|.:.|||..|:..:.
Zfish   253 SRETNKSDEDEEVDDAPKSLHPTQKTPEPLL--IGQCSGFIETTVKVKQNEMLPGPKFELDGKVG 315

  Fly   300 DIYFMLTPRQI--------HLLIEFSK----GFNCGGQQERP----------------------- 329
            .::.:|:|.||        .|.||.|:    |...||...||                       
Zfish   316 CLHLLLSPSQITHLTDLLSSLCIETSEGSAGGVVSGGGVSRPLGTDDLRLIEEDLSKQLNSELYD 380

  Fly   330 --------------KKGRSLKSAPPS--------------------EYQMHSLQQPTRMTGILGQ 360
                          :.|....|..|.                    |..:|| |.....|..|..
Zfish   381 RDLELDAEPYVQTLENGEMFYSMGPGCMTSSVLSTRSGSELSDSDMESSIHS-QSSLAQTNPLSP 444

  Fly   361 NADWCTGMSEADPSEYSVYGN----PPRSGYARSRKMSESTNSMVTSCTNTLQQELGYTEKSGEI 421
            .     ||... |..|.|.|:    |..|  ..|::.|..:.|......:.::..||        
Zfish   445 Q-----GMLNC-PRRYPVPGSFSSLPQCS--RPSKRSSRGSQSEPMKPDSFIRLSLG-------- 493

  Fly   422 LKFKVQISKIYGIALHQDILIQN--TANIDSCSTVFDHASYLRYSDTASGFFLGTLLENHIPLQN 484
                       |:.|   .|::.  ....|..|::.: .|.|.:|:.|  ||..::.... ..||
Zfish   494 -----------GVTL---TLLEEDPPPGPDGLSSLAE-VSQLFFSELA--FFKDSMFSER-DFQN 540

  Fly   485 QQYLLLRAAP---IIVSGSQQRYFQELTS--------RTTLSATAVDLIEVLDNS----KEHLLQ 534
            .:....:|.|   |.|:|:..:...|:.|        .|.||.:.::|:|.|.::    ...|||
Zfish   541 LRGSFAKACPHSHIRVTGAAVQLACEMRSAGRHSRATTTDLSFSRLELLECLWDAGGPQYTELLQ 605

  Fly   535 FD---------RQRNCPDGYHIRPEIVLTQSSSFMFKQNHNRCSNKIECSLDECTAELDISIYDR 590
            |.         ..|.|...:|...|..:.:|.|   ::...|..:.:...|.|.::|||:.|..|
Zfish   606 FQSAGVFTMGTTARPCAQFHHSLSEKHMRKSGS---RRRVVRRDSSLRVELGELSSELDLDILGR 667

  Fly   591 LGALFGSSPFSGDSASSTPYPDDPN------------QTEFVVKSENLRLHLRFPVVDGRAANDP 643
            |..:.       .:.|..|.....|            |:..:::|....|.:|||:.|.|...  
Zfish   668 LEDIL-------QALSHCPSSPQRNKAHNAESHLLEFQSSLLLQSPFAVLKVRFPIPDLRPPG-- 723

  Fly   644 LKIPWWKKNVRRDFLAVEFRSLVVSSRSQISIVSD------------------ELDVFY--CDAD 688
            |:.|..::.||.:.|:::..:|.:.|:....:..|                  :|...|  .|.:
Zfish   724 LRRPQSQRAVRNETLSLQISNLELKSQQGPDVQQDGPRSPGAKLTKLLEACFSDLHGVYEGWDGE 788

  Fly   689 KQSAVHLLKCQQKMQPN--KKIQIDV---------------------LQLKDTSDGQKKARKSPF 730
            ....:.:.|......|:  .:||:.|                     :.|::..:.::| ..|||
Zfish   789 AFPCIRVQKSTDPQNPDGIPRIQVQVNEGAGSDSMGVCEGLNRDLGSMSLENPCELREK-NSSPF 852

  Fly   731 SSKCTFGYTSHVEGLDGSVDKTDSLLPGETEEINEFCDSCTQSSKLKIFAFIPHVKVVLESKSMY 795
            ||..|...|.            :.::|.:.||:.||...|....:..:....|...::|.||..:
Zfish   853 SSNRTMFETE------------EMVIPADPEEMEEFQSQCICQCQYVVDITFPVAYILLPSKEAF 905

  Fly   796 ELIYNRLNGDLFMWEPRSPHYDISPDNEVPESKDLYAEP----QLEE---------FRRNLLLST 847
            ..||||:|.||.||||..|  ..||....|.|......|    :.||         ||..:..|.
Zfish   906 LSIYNRINNDLLMWEPPPP--PPSPPPAPPSSFQSSRSPSHHHRHEEDEFYLCKSAFRLGISESD 968

  Fly   848 SAMESSIYFSMAEPTASAPPAPPVRNEAFS---FELFVEQGTLILFSHLLDPETNQRSKEC-GKF 908
            |..|.|.::| |..:.......|..:.|.|   ..:.:.:|.|...:...: |..::.:.| |:.
Zfish   969 SEEEESQFYS-ASQSKRRKQLEPQSSHALSLLCLTVLIGKGRLQAMTDSKN-EAGRKVELCHGEL 1031

  Fly   909 QVNLKELRLFTVNGLDNDSTRSFFSIQLGEIDALHCGNTLQD-----LEL-AWSDLA--DEKLLP 965
            .::|:..::|:|....|:...:|.:|:...::..|.......     ||: .::..|  |..:.|
Zfish  1032 ILDLEGGKIFSVTQHQNNPNLNFLTIESKRVELYHKAEVPDSPIPVKLEMPRFTSPAHLDPTIYP 1096

  Fly   966 TIYNFASVHQQQDRKRMEVLSLVAEIKKQPEQRIKRMKMSFGICGAILQHHSCHSEHSWLNQLID 1030
            |....:||..::  ..:::||...::....|:.:|...::..:.||.|:||...:.|||..|::|
Zfish  1097 TEVGVSSVGGRE--TDVQMLSTAIKVTLDLERNVKEFLVALRLHGATLRHHMALTNHSWHEQIVD 1159

  Fly  1031 FMDVADFPIEEYEPFALVSELQLHVWNAGIDYRPKFFPQRAFLDLGYCTLSSNIISSMSGCTLRL 1095
            |:||.|..|..|.|.|:::.|..|:....:||||.:.|.|........:||||||...:...||.
Zfish  1160 FLDVIDDDILGYTPPAVITVLHTHLATCAVDYRPLYLPLRVLFTAESFSLSSNIIVDTATFHLRF 1224

  Fly  1096 LAEDCVLQLGLVKEESNDSL----IPVLNLGLLNISFRLNAEGSG-----QPRVDLRSSIHDMHL 1151
            :.:|..|.|....|.....|    :.||::.||.::. ...:||.     ||..:||.|.:.:|:
Zfish  1225 ILDDSALYLSDKCESDTVDLRRDYVCVLDIDLLELAI-TTWKGSDSSKLTQPLFELRCSNNVVHV 1288

  Fly  1152 KTCYDSAAALAQLIAYVANDRDLCPP-----------------EEPILNEDTKPAEPKPNEEHEM 1199
            .||.||.|||..::.|:.:..||.||                 |.|.......|||.....::::
Zfish  1289 HTCADSCAALVNMLQYLVSLGDLHPPPRHTSPTEIAGQKLPLSESPASLPSCPPAETAEINQYDL 1353

  Fly  1200 SDHTQNHVSKLMADAVIDVE----------SSPNLRAMKSPGGREEGIEIFYFPDEPKEKRKSTS 1254
            :            ||:||.|          .||::|       |...:.::.||||..:.|    
Zfish  1354 T------------DALIDTERILQEDTQDSGSPSIR-------RASPVSVYLFPDEAPKLR---- 1395

  Fly  1255 AKLQTKSLMVESPSVI-GDILDFESNVILQSYYHQSQVQPQTSLGSQVQQELGSLGNASLEERDF 1318
                        |||: |:..|.:..|......|...:..:   ||:          .|.:..||
Zfish  1396 ------------PSVLEGEESDIDGLVSTAMEAHADMMSDE---GSE----------CSTDNDDF 1435

  Fly  1319 DIIHDEEISRMDKFGVKQI-YISEDPLQIVDNHFELPHEKVDLLRPPSNFPVAESTYTLCEMTFT 1382
            .|:....:....:.|...: .:|:.|:::.|.::..|....||||.|:.|||.::...|.|::..
Zfish  1436 CILEAPGMGIPPRDGEPVVTVLSQGPIKVRDGYYSWPRGSSDLLRAPTRFPVPQNRVVLREVSVV 1500

  Fly  1383 WHLYGGRDFPDEPLKKSSS---------SATSGFGMSDTYKYGVSQAQEQDKQDKKGSKKGLLKQ 1438
            ||||||:||..:|   ||:         :|..|...|.:...|.|:.|..            .:.
Zfish  1501 WHLYGGKDFGGKP---SSAHTPHSHKVRTAAPGARGSPSRSAGPSRPQNS------------WRW 1550

  Fly  1439 PKGSQRNLEVLVEMQLSKIRFSYETYP---------------LTSMYSSRQVLLVSEIEIRDRLR 1488
            ..||.|...:|:|:||:|:.|.:|.||               |.....||||.:|.|:|:||||.
Zfish  1551 VGGSGRQHTLLMEIQLTKVSFQHEMYPVVTPSAAGPDTEPAGLVEQPISRQVFIVQELEVRDRLA 1615

  Fly  1489 SSDINKFLYHPTGNNLSHKPDENMVIVKALNVRPNPQKSSAEECSLRVSILPIKLNIDQDTLLFL 1553
            ||.||||||..|..::..:...||:.||||.|.|. ......||.||:|:||::||||||.|.||
Zfish  1616 SSQINKFLYLYTSESMPRRAHSNMLTVKALQVMPE-SGLGGPECCLRISLLPLRLNIDQDALFFL 1679

  Fly  1554 EDFFSGMFRNSASAAGGTKTEGSSSSATDMPVMSVSKMPEELSDKLPDS---------EVKEMVE 1609
            :||||.|      |||.|..         :||...:::..:.|.|.||.         ::...||
Zfish  1680 KDFFSNM------AAGVTPY---------LPVDPAAEVRTDASQKAPDDTDPASALGHDLAASVE 1729

  Fly  1610 RNLNVLIEENSLDVELEEDPATAPPVFFREVIFSPALPICFDYHGRRIELSRGPVTGLIMGLAQL 1674
            ...:   |::|...  ....::..|::|||..|:..:||..||||:|:.:.:....|:::|||||
Zfish  1730 TTYS---EQSSSSA--GSSSSSDQPIYFREFRFTSEVPIWLDYHGKRVVIEQATFAGILIGLAQL 1789

  Fly  1675 QGSGINLREIVNRRGILGWNKLCEFLAKEWLKDIKRNQLPNILSGIGPTNAVLQLFQGIYDLFRL 1739
            ..|.:.|:.:..|.|:||.:|:.::...|||.||::||||.||.|:||.::|:|||.|:.|||.:
Zfish  1790 NCSELKLKRLCCRHGLLGVDKVIQYAVNEWLTDIRKNQLPGILGGVGPMHSVVQLFHGVRDLFWM 1854

  Fly  1740 PIEQYNKDGRIIRGFQLGAQSFTARTALAALEITSRIIHLLQFTAETTFDMLSAGPSMKKR-KGG 1803
            |||||.||||||||.|.||.||...||.||||:::|::..:|.||||.:|:||..|.:.:. ..|
Zfish  1855 PIEQYRKDGRIIRGLQRGAASFGTSTASAALELSNRLVQAIQATAETVYDILSPTPPLTRYITEG 1919

  Fly  1804 RQGKR-RRQGRPKDLREGVANAYTIVREGINESANTLIEAAITEHDQKGYSGAVGAVVRQIPQLV 1867
            |...| ||..:|.|||||||.||..||||:.::|.||.:.|...|:|||..||||.|:||||..|
Zfish  1920 RPAPRPRRTPQPADLREGVAKAYDTVREGVIDTAQTLCDVASRGHEQKGLPGAVGGVLRQIPPTV 1984

  Fly  1868 VCPAVLATQATTNILGGAKSSLIPEAKLEARDKWKQE 1904
            |.|.::|::||:|:|||.::.:.|:|:.|...||:.|
Zfish  1985 VRPLIVASEATSNLLGGMRNQIKPDARKEDFLKWRTE 2021

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg2NP_001261341.1 Chorein_N 17..117 CDD:289396 44/99 (44%)
ATG_C 1814..1902 CDD:286423 45/87 (52%)
atg2aXP_009306032.1 Chorein_N 14..118 CDD:289396 46/105 (44%)
ATG_C 1933..2019 CDD:286423 44/85 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579550
Domainoid 1 1.000 515 1.000 Domainoid score I300
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 704 1.000 Inparanoid score I643
OMA 1 1.010 - - QHG46464
OrthoDB 1 1.010 - - D18730at33208
OrthoFinder 1 1.000 - - FOG0002365
OrthoInspector 1 1.000 - - oto41487
orthoMCL 1 0.900 - - OOG6_102791
Panther 1 1.100 - - LDO PTHR13190
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1792
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1312.910

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