Sequence 1: | NP_647745.1 | Gene: | Non2 / 38341 | FlyBaseID: | FBgn0035370 | Length: | 244 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_114030.2 | Gene: | Smarcd1 / 83797 | MGIID: | 1933623 | Length: | 515 | Species: | Mus musculus |
Alignment Length: | 272 | Identity: | 50/272 - (18%) |
---|---|---|---|
Similarity: | 85/272 - (31%) | Gaps: | 112/272 - (41%) |
- Green bases have known domain annotations that are detailed below.
Fly 71 GKDPDADPD------DESE----PSE----EEDPSSSEEEAAKKKKQSPKKRPQPTKHKAP---- 117
Fly 118 ------------------------------KKKRK-------TLNADDSGTESDAGSDSDYE--- 142
Fly 143 ---------VVKKPAAKKKAKAAG------------------------GTGSGRKSTGF------ 168
Fly 169 ---------------TRAYNLSPELSALMGESSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDD 218
Fly 219 ELMKVMKIRRFR 230 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Non2 | NP_647745.1 | DEK_C | 7..57 | CDD:285919 | |
SWIB | 170..242 | CDD:280380 | 17/61 (28%) | ||
Smarcd1 | NP_114030.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..128 | 10/45 (22%) | |
Bindin | 39..>98 | CDD:251078 | 3/15 (20%) | ||
Interaction with ESR1, NR1H4, NR3C1, PGR and SMARCA4. /evidence=ECO:0000250 | 43..167 | 15/84 (18%) | |||
Interaction with SMARCC1 and SMARCC2. /evidence=ECO:0000250 | 168..474 | 35/186 (19%) | |||
Necessary for GR/NR3C1-mediated remodeling and transcription from chromatin, required for GR/NR3C1 interaction with the BRG1/SMARCA4 complex in vivo. /evidence=ECO:0000250 | 180..515 | 33/174 (19%) | |||
Rsc6 | 207..408 | CDD:227818 | 26/147 (18%) | ||
SWIB_BAF60A | 294..370 | CDD:349493 | 17/60 (28%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5531 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1401 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |