DRSC/TRiP Functional Genomics Resources

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Protein Alignment Non2 and smarcd3b

DIOPT Version :9

Sequence 1:NP_647745.1 Gene:Non2 / 38341 FlyBaseID:FBgn0035370 Length:244 Species:Drosophila melanogaster
Sequence 2:XP_021333238.1 Gene:smarcd3b / 562140 ZFINID:ZDB-GENE-080509-2 Length:532 Species:Danio rerio


Alignment Length:264 Identity:51/264 - (19%)
Similarity:86/264 - (32%) Gaps:80/264 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 TISAKRVREQVEGKLNCSLLSRKKEFDKI----VMEVINEQQDEEDEDDDEGKDPDADPDDESEP 84
            :|..|:...|.|...|.:  .|:|..|||    :.|::.|.|...|....|.|            
Zfish   130 SILRKKWSTQTERNSNSA--KRRKMADKILPQRIRELVPESQAYMDLLAFERK------------ 180

  Fly    85 SEEEDPSSSEEEAAKKKK---QSPKKRPQPTKHKAPKKKRKTLNADDSGTESDAGSDSDYEV--- 143
                     .::...:|:   |...|||...|.|.......|.||.....|...||.:.:|:   
Zfish   181 ---------LDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNAAKPDAEDSEGSIASWELRVE 236

  Fly   144 --VKKPAAKKKAKAAG------------------------GTGSGRKSTGF-------------- 168
              :.....|.|.|.:.                        .||:.:::.||              
Zfish   237 GKLLDDPGKMKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTGTTQETDGFQVKRPGDVNVRCTL 301

  Fly   169 -------TRAYNLSPELSALMGESSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDELMKVMKI 226
                   ...:.|.|.|:.|:|..:..|..:::.:|..:|...|.|..:|::..||....::...
Zfish   302 LLMLDYQPPQFKLDPRLARLLGIHTQTRSSIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDC 366

  Fly   227 RRFR 230
            .|.:
Zfish   367 PRLK 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Non2NP_647745.1 DEK_C 7..57 CDD:285919 11/36 (31%)
SWIB 170..242 CDD:280380 14/61 (23%)
smarcd3bXP_021333238.1 SWIB 311..382 CDD:308037 14/60 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583824
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5531
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1401
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.770

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