DRSC/TRiP Functional Genomics Resources

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Protein Alignment Non2 and smarcd1

DIOPT Version :10

Sequence 1:NP_647745.1 Gene:Non2 / 38341 FlyBaseID:FBgn0035370 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_938172.1 Gene:smarcd1 / 323115 ZFINID:ZDB-GENE-030131-1835 Length:510 Species:Danio rerio


Alignment Length:257 Identity:48/257 - (18%)
Similarity:81/257 - (31%) Gaps:100/257 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 PDADPD-DESEPSE-EEDPSSSEEEAAKKKKQSPKKRPQPTKHKAP------------------- 117
            |..||. ....|:: ::....:..:.|||||.:.|..||..:...|                   
Zfish    92 PVMDPSRKRPAPNQIQQVQQQNRNQHAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTI 156

  Fly   118 ---------------KKKRK-------TLNADDSGTESDAGSDSDYE------------VVKKPA 148
                           |:|||       |.|......|...|:.:.:|            |.|..|
Zfish   157 MRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEA 221

  Fly   149 AKKKAKAAG------------------------GTGSGRKSTGF--------------------- 168
            .|:|.|.:.                        .|.:.:::.||                     
Zfish   222 TKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQ 286

  Fly   169 TRAYNLSPELSALMGESSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDELMKVMKIRRFR 230
            ...|.|.|.|:.|:|..:..|..:::.:|..:|...|.||..::|..||..|.::.:.:|.:
Zfish   287 PPQYKLDPRLARLLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMK 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Non2NP_647745.1 DEK_C 5..57 CDD:462592
SWIB-MDM2_like 172..242 CDD:349489 17/59 (29%)
smarcd1NP_938172.1 SWIB_BAF60A 289..365 CDD:349493 17/60 (28%)
Blue background indicates that the domain is not in the aligned region.

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