DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Non2 and ham-3

DIOPT Version :9

Sequence 1:NP_647745.1 Gene:Non2 / 38341 FlyBaseID:FBgn0035370 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_499250.1 Gene:ham-3 / 176426 WormBaseID:WBGene00044072 Length:446 Species:Caenorhabditis elegans


Alignment Length:289 Identity:64/289 - (22%)
Similarity:101/289 - (34%) Gaps:95/289 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EDLRREIQAVLKDADLATISAKR-------------------VREQV------------EGKLNC 40
            :.:||.|.|.| ....|.|...|                   |||.|            |.||: 
 Worm    22 QQVRRPINAPL-PGQTAQIQGNRGPQPPKKKKRYADKLIQPKVRELVPESQAYMDLLAFEQKLD- 84

  Fly    41 SLLSRKKEFDKIVMEVINEQQDEE-------DEDDDEGKDPDADPDDESEPSEEEDPSSSEEEAA 98
            |.::||| .|  |.|.:...|..:       ......||:|:.:.||.|.|..|    ...|...
 Worm    85 STITRKK-ID--VQEALKRPQKIKKRLRIYISHTFIAGKEPEKEGDDASVPMWE----LRVEGRL 142

  Fly    99 KKKKQSPK--KRPQPTKHKAPKKKRKT--------LNADDSGTE--------SDAGSDSDYEVVK 145
            ....|.|.  ..|:|    |||:|..:        |:.|..|.:        :...:::|...||
 Worm   143 LDDMQHPTVGANPRP----APKRKFSSFFKSLVIELDKDIYGPDNHLVEWHRTPQTNETDGFQVK 203

  Fly   146 KPAAKKKAKAAGGTGSGRKSTGFT---------RAYNLSPELSALMGESSLPRHEVVKKVWAIIK 201
            :|              |.:....|         ..:.|.|.|:.::|.::..|..:::.:|..||
 Worm   204 RP--------------GDRPVKCTILLLLDYQPMKFKLHPRLAKVLGIAAETRPRIIEALWQYIK 254

  Fly   202 ERDLYDPKNKQFAICD---DELMKVMKIR 227
            ...|.||:::.....|   ::...|.|:|
 Worm   255 THKLQDPQDRDTINNDLFLEQCFGVSKMR 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Non2NP_647745.1 DEK_C 7..57 CDD:285919 22/80 (28%)
SWIB 170..242 CDD:280380 15/61 (25%)
ham-3NP_499250.1 SWIB-MDM2 224..300 CDD:422951 15/60 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5531
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1401
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

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