DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mrtf and mrtfa

DIOPT Version :9

Sequence 1:NP_001137879.3 Gene:Mrtf / 38338 FlyBaseID:FBgn0052296 Length:1788 Species:Drosophila melanogaster
Sequence 2:NP_001072754.1 Gene:mrtfa / 780211 XenbaseID:XB-GENE-486827 Length:1033 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MrtfNP_001137879.3 RPEL 387..412 CDD:128947
RPEL 433..458 CDD:128947
SAP 871..905 CDD:280251
mrtfaNP_001072754.1 RPEL 99..123 CDD:128947
RPEL 142..167 CDD:128947
RPEL 186..210 CDD:128947
SAP 453..484 CDD:396567
COG4372 <570..>766 CDD:226809
cdk7 <589..>666 CDD:129661
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 164 1.000 Inparanoid score I4076
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001082
OrthoInspector 1 1.000 - - otm48223
Panther 1 1.100 - - LDO PTHR22793
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2343
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.150

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