DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mrtf and si:dkeyp-69b9.3

DIOPT Version :9

Sequence 1:NP_001137879.3 Gene:Mrtf / 38338 FlyBaseID:FBgn0052296 Length:1788 Species:Drosophila melanogaster
Sequence 2:XP_005157961.1 Gene:si:dkeyp-69b9.3 / 573741 ZFINID:ZDB-GENE-100922-275 Length:757 Species:Danio rerio


Alignment Length:876 Identity:197/876 - (22%)
Similarity:303/876 - (34%) Gaps:288/876 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   339 DKNKESLKVKLMVRRPHSQL-VEQGIIPSLKTSPAIHEQCKQLERAKTSDLLKAKI--QQRPNRE 400
            :|.:..|::::..||..::| .|.|...|:.......|....|:...|.....:.:  |..|:| 
Zfish    14 NKFRSVLQLRIQNRRQQNELNAEAGTKASVPDKTGDKEVSNGLQDGSTQKSPPSGLTAQTAPDR- 77

  Fly   401 DLERLHILEEDECHIDPSLAEKQRMLKKARLADQLNSQIQHRPGPLELIKKNILHTEK----PIE 461
                           ..|.|.:|   ||||||:.|..:||.||.||||::::||..|.    |.:
Zfish    78 ---------------SYSGAHRQ---KKARLAEDLTEKIQSRPRPLELLQRHILPPENTALLPSD 124

  Fly   462 KIVKEGLVSFKATSEGLLTRPQHPHSYVTFDDDSLSSESDTRQTPPRLDEAMVATSSSPTDVLQA 526
            ....:...|..|:.|.|     ..|....|...|.....|...:    |.:.|||..||.:|.|.
Zfish   125 VFEDDNSSSASASPEQL-----GMHQSPGFSSSSPGQGGDQSLS----DVSPVATPISPNNVQQC 180

  Fly   527 AAA---SAGIVTMALTMPTAGQLVVTSPQILPQQQQPKAIVVPAPVPPPPPPPPPLPMASIIKVK 588
            ..|   :...::..:||...|...:|:       .:||.:.:|:..||..|              
Zfish   181 RLALLPATECISQPMTMTVTGSNSITT-------GRPKGMYMPSQTPPLLP-------------- 224

  Fly   589 QETANLYEELCQSVTGTTASPVNHLYSPCSLASSTSTLSPLSSIASPPPPPMTTTRLHLAPVSVK 653
                                                      ..|.||.||..:    :...|:.
Zfish   225 ------------------------------------------KTAQPPAPPSHS----ILGGSLN 243

  Fly   654 SDAPGKDKNRKKSKSKPVSKARTIKFHEYKGPPSAAG---------QKQDQTQ--PEETSYQLML 707
            |..|.:.  ||...|||  |.|.:|:|:|..|....|         ||.:.:|  ..::||..:|
Zfish   244 SSRPSRP--RKPRDSKP--KMRKLKYHQYIPPDQRTGTGSGAANASQKNNNSQVPATDSSYSHLL 304

  Fly   708 EQQNCLLKFLENLNKNQSIIPAPSAPGVMLPAAPGATNNSITVTTKTVPALASQSAPAPAPISLP 772
            :||...|: |:.||:.|           .||    .||:...:.|       |.|.|..:|.|  
Zfish   305 QQQQVFLQ-LQILNQQQ-----------QLP----VTNSENNLKT-------SGSTPQSSPQS-- 344

  Fly   773 NTISITSSSGGAPLNFGDATMLTPTPAATPTPPTLSLIAAPQQQLQLHQQHQQLHQPTPVQHPPP 837
                                   .||:..|:.|..|                      |:.....
Zfish   345 -----------------------ATPSTNPSTPDTS----------------------PIHQAEL 364

  Fly   838 LPSPALSVSSSIPPSPATSYAESTTSSITDLARLEKMKVSDLKQHLKRRNLPVSGPKPHLIERLK 902
            |||                             .|:.:.||.|:|.|::|.|||||.||.|:|||:
Zfish   365 LPS-----------------------------NLDDLTVSVLRQQLRKRGLPVSGTKPALLERLR 400

  Fly   903 PY-LPLEPLDSNVTPAPTSNNSNTT----PEVITIS-DAMDTSN----CGLLEQPPPVTMLVSDA 957
            |: :|..||    ||||.....:|.    |..:.:| .::|||:    .||.|     ..|.||.
Zfish   401 PFQMPRPPL----TPAPLCQLGSTLEPSHPASLNLSPTSIDTSSNSTYTGLAE-----PSLASDG 456

  Fly   958 SMEHEQMDVVQQQMDNTHPM------TLQTILPPQPQTATIILTNEELLREQQRKIDELQRQLQR 1016
            .:              |.|.      ||.|..|..|..||        .|..| .:|||..:|:.
Zfish   457 FL--------------TSPSSAGSSPTLHTSSPQMPSGAT--------WRPGQ-AVDELSVELEM 498

  Fly  1017 SQQELQKIRQRQQQQQ------HQ-QQQTVTAQVVNALPSQQITLITTTSNGPQQTLTVMPQQVE 1074
            .::...:.|...:..|      |. .||........|....|..|.|..|...:.....:...:.
Zfish   499 RERIRSRPRDGAKDTQLCGSSLHPFLQQEPGCNRGKAETGGQELLFTYCSGDGKVNCCQLCDAIG 563

  Fly  1075 KNFPAKVTVKATGGNSNHKVNGLQQQ-GSAAKKPASSNSNS-----NSNISSSNPPPINQKMVVK 1133
            ::|...:.:.|:...::..|..|::: ..|.::.....|.|     :.||..|:    |..:|..
Zfish   564 QDFDLPMQITASPAQASPTVRSLEEELQEAIQRVQMDPSQSIDDILDVNIGGSD----NSSLVTD 624

  Fly  1134 QQLEAKIQKQKAAAAAAAQQQQQQQQQQQQQ 1164
            .|..|.:    .:..::|.|..|.|..::|:
Zfish   625 IQSAALV----VSGFSSALQPDQSQSTKRQK 651

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MrtfNP_001137879.3 RPEL 387..412 CDD:128947 3/26 (12%)
RPEL 433..458 CDD:128947 11/24 (46%)
SAP 871..905 CDD:280251 19/34 (56%)
si:dkeyp-69b9.3XP_005157961.1 RPEL 94..115 CDD:308408 11/20 (55%)
SAP 369..402 CDD:307935 18/32 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580434
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001082
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22793
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.030

Return to query results.
Submit another query.