DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ProRS-m and pars2

DIOPT Version :9

Sequence 1:NP_647737.1 Gene:ProRS-m / 38331 FlyBaseID:FBgn0027082 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_991118.1 Gene:pars2 / 325494 ZFINID:ZDB-GENE-030131-4219 Length:477 Species:Danio rerio


Alignment Length:438 Identity:180/438 - (41%)
Similarity:269/438 - (61%) Gaps:22/438 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PALITPKNAVVKQTEQL----------SRSQKLLTELGLVKSGSNGTYQIMPMAQRSVDKCIDLV 64
            |.:.||..:.:.|...|          .|||:|:.:.||:...:.|.:..:|:|.||::|.:.|:
Zfish    42 PVIPTPLVSRLFQPSNLREGQDGGDLTCRSQRLMVQTGLIHPSNPGCFYYLPVALRSLEKLVRLI 106

  Fly    65 QSNMQQAGGQKITLPILTPTGLWKKTGRLDGDISEFYMVRDRSGKQFLMSPTHEEAVTAMLATTS 129
            ...|...||||:.:|.|....||||:||.:....|.:.:.||...::.:.||||||||.:.|:.:
Zfish   107 DEEMHAIGGQKVDMPALCSAELWKKSGRWELMGKEMFRLLDRHNGEYCLGPTHEEAVTELFASQT 171

  Fly   130 PISYRQLPLRLFQIGPKFRDELKTRFGLMRAKEFLMKDMYSFDVSEETAMETYTLVNAAYDRLFK 194
            .:||::|||.|:|:..|||||.|.:|||:|.:||.||||||||::||.|:.||..|..||.|:..
Zfish   172 TMSYKKLPLLLYQVTRKFRDEQKPKFGLLRGREFYMKDMYSFDINEEAALHTYNSVCQAYRRILD 236

  Fly   195 QLEVPFVKVNAATGIMGGSVSHEYHYVSPVGEDNLLQCSSCGFAGNSEVVK-APASCPSCNSSDL 258
            :|.:.:|:|.|.||.:||::|||:...:.:|||.||.|.:|||:.|.|.:: ..|.|..|.:..|
Zfish   237 RLHLKWVQVQADTGNIGGTLSHEFQLPADIGEDKLLVCGNCGFSANIETMEPGQAKCSQCQTGKL 301

  Fly   259 KEVRGVEVAHTFLLGDKYSKPLGATFLNTTGKPQSLVMGCYGIGITRVIAAALEVLSSDHELRWP 323
            .|.||:||.|||.||.|||:...|.|:|.:..|....|||:|:|:||::||::||:|::..:.||
Zfish   302 TESRGIEVGHTFYLGTKYSQAFKALFVNASNVPAVAEMGCFGLGVTRILAASIEVMSTEDAIHWP 366

  Fly   324 KLLAPYDVCLIGPKQGSKEQPEAEVIENELLLNVGEICGH--QELLHDDRKELTIGKRLLEAKRL 386
            .|:|||.||::.||:|||.. ||.....||..::|....:  .|::.|||.::||||||.:||.|
Zfish   367 GLIAPYQVCVLPPKKGSKAH-EATQKAEELAQSLGNSLPNLRGEVVLDDRTQMTIGKRLKDAKIL 430

  Fly   387 GHPLTIVVGAKSARLDSPKLEVHTSK-GETYEL------DFSETLKLV 427
            |:|..:||| ::|..|....||...: |||..|      |...|::.:
Zfish   431 GYPFVVVVG-QTALDDLASFEVVCQQSGETLFLSKDGLVDLLSTVETI 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ProRS-mNP_647737.1 PRK09194 3..422 CDD:236405 179/431 (42%)
ProRS_core_prok 24..313 CDD:238402 127/299 (42%)
ProRS_anticodon_short 328..428 CDD:238438 42/109 (39%)
pars2NP_991118.1 PRK09194 49..471 CDD:236405 176/423 (42%)
ProRS_core_prok 66..356 CDD:238402 126/289 (44%)
HGTP_anticodon 371..471 CDD:294191 41/101 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170584211
Domainoid 1 1.000 220 1.000 Domainoid score I2563
eggNOG 1 0.900 - - E1_COG0442
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5830
Inparanoid 1 1.050 343 1.000 Inparanoid score I2311
OMA 1 1.010 - - QHG52122
OrthoDB 1 1.010 - - D307110at33208
OrthoFinder 1 1.000 - - FOG0004664
OrthoInspector 1 1.000 - - oto40592
orthoMCL 1 0.900 - - OOG6_103003
Panther 1 1.100 - - LDO PTHR42753
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1453
SonicParanoid 1 1.000 - - X3277
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

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