DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ProRS-m and Eprs

DIOPT Version :9

Sequence 1:NP_647737.1 Gene:ProRS-m / 38331 FlyBaseID:FBgn0027082 Length:458 Species:Drosophila melanogaster
Sequence 2:XP_006250487.1 Gene:Eprs / 289352 RGDID:1310952 Length:1519 Species:Rattus norvegicus


Alignment Length:457 Identity:92/457 - (20%)
Similarity:155/457 - (33%) Gaps:121/457 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 NGTYQIMPMAQRSVDKCIDLVQSNMQQAGGQKITLPILTPTGLWKKTGRLDGDISEFYMVRDRSG 108
            :|.|.:.|.:....:...|...:.:::.|.:....||....|..:|......|.:.......|||
  Rat  1051 SGCYILRPWSYSIWESIKDFFDAEIKKLGVENCYFPIFVSQGALEKEKNHIADFAPEVAWVTRSG 1115

  Fly   109 KQFLMSPTHEEAVTAMLATTSPI----------SYRQLPLRLFQIGPKFRDELKTRFGLMRAKEF 163
            |..|..|      .|:..|:..:          |:|.||:||.|.....|.|.|.....:|.:||
  Rat  1116 KTELAEP------IAIRPTSETVMYPAYAKWVQSHRDLPIRLNQWCNVVRWEFKHPQPFLRTREF 1174

  Fly   164 LMKDMYS-FDVSEETAMETYTLVNAAYDRLFKQ-LEVPFVKVNAATGIMGGSVSHEYHYVSPVGE 226
            |.::.:| |...||.|.|...::. .|.|:::: |.:|.|:        |.....|         
  Rat  1175 LWQEGHSAFATFEEAADEVLQILE-LYARVYEELLAIPVVR--------GRKTEKE--------- 1221

  Fly   227 DNLLQCSSCGFAGNSEVVKAPASCPSCNSSDLKEVRGVEVAHTFLLGDKYSKPLGATFLN--TTG 289
                     .|||........|..    |:..:.::|....|   ||..:||.....|.:  |.|
  Rat  1222 ---------KFAGGDYTTTLEAFI----SASGRAIQGATSHH---LGQNFSKMCEIVFEDPKTPG 1270

  Fly   290 KPQSLVMGCYGIGITRVIAAALEVLSSDHELRWPKLLAPYDVCLIGPKQGSKEQPEAEVIENELL 354
            :.|......:|: .||.|...:.|...:..|..|..:|...|.:|.                   
  Rat  1271 EKQFAYQCSWGL-TTRTIGVMIMVHGDNMGLVLPPRVASVQVVVIP------------------- 1315

  Fly   355 LNVGEICGHQELLHDDRKELTIGK------RLLEA---------------------KRLGHPLTI 392
                  ||....|.::.:|..:.|      |||.|                     :..|.|:.:
  Rat  1316 ------CGITNTLSEEDREALMAKCNEYRRRLLGADIRARVDLRDNYSPGWKFNHWELKGVPVRL 1374

  Fly   393 VVGAKSARLDSPKLEVHTSKGETYELDFSETLKLVAEHSQHK-----KSLERGCFQSETEESKSR 452
            .||.:         ::.:.:......|..|.|.:..:.::.|     :.::...|...:|:.||.
  Rat  1375 EVGPR---------DMKSCQFVAVRRDTGEKLTIAEKEAESKLKGVLEDIQLNLFTRASEDLKSH 1430

  Fly   453 SV 454
            .|
  Rat  1431 MV 1432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ProRS-mNP_647737.1 PRK09194 3..422 CDD:236405 84/418 (20%)
ProRS_core_prok 24..313 CDD:238402 64/282 (23%)
ProRS_anticodon_short 328..428 CDD:238438 18/126 (14%)
EprsXP_006250487.1 PLN02907 6..718 CDD:215492
GST_C_GluProRS_N 74..157 CDD:198342
tRNA-synt_1c 197..498 CDD:279135
tRNA-synt_1c_C 511..688 CDD:281883
WHEP-TRS 760..812 CDD:278865
WEPRS_RNA 833..882 CDD:238473
WHEP-TRS 911..962 CDD:278865
PRK08661 1026..1519 CDD:236327 92/457 (20%)
ProRS_core_arch_euk 1030..1293 CDD:238401 64/282 (23%)
ProRS_anticodon_zinc 1299..1519 CDD:238439 27/168 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0442
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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