DRSC/TRiP Functional Genomics Resources

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Protein Alignment ProRS-m and SPBC24C6.03

DIOPT Version :9

Sequence 1:NP_647737.1 Gene:ProRS-m / 38331 FlyBaseID:FBgn0027082 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_595957.1 Gene:SPBC24C6.03 / 2540642 PomBaseID:SPBC24C6.03 Length:425 Species:Schizosaccharomyces pombe


Alignment Length:396 Identity:153/396 - (38%)
Similarity:235/396 - (59%) Gaps:15/396 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 SQKLLTELGLVKSGSNGTYQIMPMAQRSVDKCIDLVQSNMQQAGGQKITLPILTPTGLWKKTGRL 93
            :.:||.::|.::....|.:|.:|:..|..:|..||:..:|:..|...|:|..|:...:|:|:||.
pombe    27 ANQLLIDMGFIQPSMPGIFQYLPLGLRVQNKICDLLHISMRSLGASAISLAHLSSKEIWEKSGRW 91

  Fly    94 DGDISEFYMVRDRSGKQFLMSPTHEEAVTAMLATTSPISYRQLPLRLFQIGPKFRDELKTRFGLM 158
            ....||.:.:.||:.::..::|||||.||..:||... |.:|||:|::|||.||||||:.|.||:
pombe    92 QKTGSELFRLHDRNDREMCLAPTHEEDVTRTMATIID-SQKQLPIRVYQIGRKFRDELRPRGGLL 155

  Fly   159 RAKEFLMKDMYSFDVSEETAMETYTLVNAAYDRLFKQLEVPFVKVNAATGIMGGSVSHEYHYVSP 223
            |.:||:|||:|:||:.:.:||:||..|..||...||::.:|||.|.||||.:||::|||:||..|
pombe   156 RGREFMMKDLYTFDIDKASAMKTYEDVLQAYHTFFKEVGLPFVMVKAATGNIGGNLSHEFHYRHP 220

  Fly   224 VGEDNLLQCSSCGFAGNSEVV-----KAPASCPSCNSSDLKEVRGVEVAHTFLLGDKYSKPLGAT 283
            ||||.:..|.||.::.|||::     .:..|||:|| ..|.....:||.|.|.||..||....||
pombe   221 VGEDVIYTCPSCHYSTNSEMLDLSKTSSDISCPNCN-DQLTSTTAIEVGHAFYLGKIYSSKFNAT 284

  Fly   284 FLNTTGKPQSLVMGCYGIGITRVIAAALEVLSSDHELRWPKLLAPYDVCLIGPKQGSKEQPEAEV 348
             :....|.:.|.|||||||::|:|||...|......|.||..:||:.| |:.|...:..| .||.
pombe   285 -VEVKNKQEVLHMGCYGIGVSRLIAAVAHVTKDAKGLVWPSSIAPWKV-LVVPTSDNHIQ-SAET 346

  Fly   349 IENELLLNVGEICGHQELLHDDRKELTIGKRLLEAKRLGHPLTIVVGAKSARLDSPKLEVHTSKG 413
            :.:.    ...:.|...:|.:||:....|.::.:|:.:|:|..||||::.......::.|.:| |
pombe   347 VYDA----TANVVGFDNVLLEDRQNRAFGYKMRDAELIGYPFVIVVGSRFQEEGICEIIVRSS-G 406

  Fly   414 ETYELD 419
            |.|:||
pombe   407 ERYKLD 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ProRS-mNP_647737.1 PRK09194 3..422 CDD:236405 153/396 (39%)
ProRS_core_prok 24..313 CDD:238402 122/288 (42%)
ProRS_anticodon_short 328..428 CDD:238438 26/92 (28%)
SPBC24C6.03NP_595957.1 ProS 4..420 CDD:223519 153/396 (39%)
ProRS_core_prok 22..313 CDD:238402 122/288 (42%)
ProRS_anticodon_short 328..421 CDD:238438 26/92 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 199 1.000 Domainoid score I668
eggNOG 1 0.900 - - E1_COG0442
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H5830
Inparanoid 1 1.050 275 1.000 Inparanoid score I692
OMA 1 1.010 - - QHG52122
OrthoFinder 1 1.000 - - FOG0004664
OrthoInspector 1 1.000 - - oto101359
orthoMCL 1 0.900 - - OOG6_103003
Panther 1 1.100 - - LDO PTHR42753
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1453
SonicParanoid 1 1.000 - - X3277
TreeFam 1 0.960 - -
1312.860

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