DRSC/TRiP Functional Genomics Resources

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Protein Alignment ProRS-m and Pars2

DIOPT Version :9

Sequence 1:NP_647737.1 Gene:ProRS-m / 38331 FlyBaseID:FBgn0027082 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_001077356.1 Gene:Pars2 / 230577 MGIID:2386296 Length:511 Species:Mus musculus


Alignment Length:440 Identity:189/440 - (42%)
Similarity:274/440 - (62%) Gaps:21/440 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KASRIFCPALITPKNAVVKQTEQLS----------RSQKLLTELGLVKSGSNGTYQIMPMAQRSV 57
            :..|:....:..|:|  :::.:.||          :||:|:.::||:...|.|.|.:||...|:|
Mouse    72 RGQRLVLSRMFQPQN--LREDQVLSLEGRASDLTCKSQRLMLQVGLILPASPGCYHLMPYTVRAV 134

  Fly    58 DKCIDLVQSNMQQAGGQKITLPILTPTGLWKKTGRLDGDISEFYMVRDRSGKQFLMSPTHEEAVT 122
            :|.:.::...||..|||||.:|.|:|..||:.|.|.|....|...:|||.||::.:.||||||||
Mouse   135 EKLVRVIDQEMQAIGGQKINMPSLSPAELWRATSRWDLMGRELLRLRDRHGKEYCLGPTHEEAVT 199

  Fly   123 AMLATTSPISYRQLPLRLFQIGPKFRDELKTRFGLMRAKEFLMKDMYSFDVSEETAMETYTLVNA 187
            |::|:...:||:||||.|:|:..|||||.:.||||:|.:||.|||||:||.|.|.|.|||.||..
Mouse   200 ALVASQKKLSYKQLPLLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSSEAAQETYGLVCD 264

  Fly   188 AYDRLFKQLEVPFVKVNAATGIMGGSVSHEYHYVSPVGEDNLLQCSSCGFAGNSEVVK-APASCP 251
            ||.|||.:|.:.::|..|..|.:||::|||:.....:|||.|:.|.||.|:.|:|::. :...||
Mouse   265 AYCRLFDRLGLQWMKARADVGSIGGTMSHEFQLPVDIGEDRLVVCPSCHFSANTEILDLSQKICP 329

  Fly   252 SCNSSDLKEVRGVEVAHTFLLGDKYSKPLGATFLNTTGKPQSLVMGCYGIGITRVIAAALEVLSS 316
            .| ...|.|.:|:||.|||.|..|||....|.|.|..|:.....|||||:|:||::|||:||||:
Mouse   330 DC-QGPLTETKGIEVGHTFYLSTKYSSIFNALFTNAHGESLLAEMGCYGLGVTRILAAAIEVLST 393

  Fly   317 DHELRWPKLLAPYDVCLIGPKQGSKEQPEAEVIE---NELLLNVGEICGHQELLHDDRKELTIGK 378
            :..:|||:|||||.||:|.||:||||....|::|   ::::..|.::.|  |:|.|||..||||.
Mouse   394 EDCIRWPRLLAPYQVCVIPPKKGSKETAATEIVEKLYDDIMEAVPQLRG--EVLLDDRTHLTIGN 456

  Fly   379 RLLEAKRLGHPLTIVVGAKSARLDSPKLEVHT-SKGETYELDFSETLKLV 427
            ||.:|.:||:|..|:.| |.|..|....||.: :.||...|.....::|:
Mouse   457 RLKDANKLGYPFVIIAG-KRALEDPAHFEVWSQNTGEVVFLTKEGVMELL 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ProRS-mNP_647737.1 PRK09194 3..422 CDD:236405 188/433 (43%)
ProRS_core_prok 24..313 CDD:238402 135/299 (45%)
ProRS_anticodon_short 328..428 CDD:238438 41/104 (39%)
Pars2NP_001077356.1 PRK09194 78..506 CDD:236405 188/434 (43%)
ProRS_core_prok 101..390 CDD:238402 133/289 (46%)
ProRS_anticodon_short 405..506 CDD:238438 41/104 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167840042
Domainoid 1 1.000 216 1.000 Domainoid score I2696
eggNOG 1 0.900 - - E1_COG0442
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5830
Inparanoid 1 1.050 349 1.000 Inparanoid score I2275
Isobase 1 0.950 - 0 Normalized mean entropy S2325
OMA 1 1.010 - - QHG52122
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004664
OrthoInspector 1 1.000 - - oto93759
orthoMCL 1 0.900 - - OOG6_103003
Panther 1 1.100 - - LDO PTHR42753
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1453
SonicParanoid 1 1.000 - - X3277
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.740

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