DRSC/TRiP Functional Genomics Resources

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Protein Alignment MEP-1 and CG11456

DIOPT Version :9

Sequence 1:NP_001137875.1 Gene:MEP-1 / 38327 FlyBaseID:FBgn0035357 Length:1152 Species:Drosophila melanogaster
Sequence 2:NP_001262130.1 Gene:CG11456 / 40309 FlyBaseID:FBgn0037031 Length:445 Species:Drosophila melanogaster


Alignment Length:547 Identity:104/547 - (19%)
Similarity:156/547 - (28%) Gaps:212/547 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   643 KMRKAQVQNSKEFEMAINALSGNLQ--ASKTKNAPFK-FR-------MKRCEF---CNFKSESAM 694
            |.:.|...||::.:..:.. |.|.:  ||:.:..||| ||       ::.|.|   |.||.:.|.
  Fly    52 KEQTAAGSNSQDKQTVVER-SENSEPPASELQPMPFKDFRLVLRANMLEPCSFGKECPFKFQDAT 115

  Fly   695 AMANHYETPHMNGVLYKCNFCTFEIRNATEIVYHMEAVHNIKARLIKPLPYHQCP--NCGFEDNG 757
            .|..|... |..| .:.|..|..|:.|......|:...|.:...|:      .||  .|.::...
  Fly   116 KMELHCSC-HKGG-SFSCCECGMELPNWRRCSAHLWKAHQVDVDLL------VCPVFECNYKSPI 172

  Fly   758 KAKLARHQPVCAKKFRPELNLAPPNDWEAPAKIPRIKPRHGLVGTATAYQAMAAQAAAQKAALAN 822
            .|.:.||..| .||:||                                               .
  Fly   173 SALVWRHMQV-HKKWRP-----------------------------------------------R 189

  Fly   823 IQQQQAAAQARNNL--QAAALAAQNAAKMRQRAPQPPKQNIVRNPAPVRGGNAMNAGLSLPNSYQ 885
            :.:..||.|.|..|  |:|.:|||.||       .||.                    |..|.| 
  Fly   190 VLRSLAAVQRRRKLKEQSAEMAAQPAA-------LPPS--------------------SKKNKY- 226

  Fly   886 LAAGQLVQASKKPMAGQPSISITPLPRQSSVGAGAGASSSKAPQAAAGMKPGQSPSGNNKAQFVI 950
                   .|.|                                                     .
  Fly   227 -------YAEK-----------------------------------------------------T 231

  Fly   951 CEICDGYIKDLEQLRNHMQWMH-KVK------------------IHPKMIYNRPPLNCQKCQFRF 996
            ||||:....:.:.|..|::.:| |:|                  ||.:......||.|.:|:|..
  Fly   232 CEICNRKFVNGKTLSKHVKTVHNKIKPFICNVCGKKTARKASLIIHMRQHTGEKPLQCGECKFST 296

  Fly   997 FTDQGLERHLLGSHGLVTSSMQEAANKGKDAGRCPVCGRMYQWKLLNHVSRDHHMTLKPAHLSYK 1061
            .....|.:|          ..:..:...:.:.:|..|.  |.....|.:.|  ||.|..|. :|:
  Fly   297 RDPSVLHKH----------RQRHDSQDTRSSLKCSQCD--YFCIQANALKR--HMRLNHAE-AYR 346

  Fly  1062 ---CTVCTATFGMYKQFETHVYTAHSTVARKAMDSKKNSAQSSGSGSGAGMSRSSLGAANDSLLK 1123
               |.:|:.|....::...|.......:.....||....|.........|.....:.|   ....
  Fly   347 DLCCDICSFTSINVERLRAHKQDHRQGLITNCEDSMDARAAGFKYPRKVGDKNGEISA---DCFM 408

  Fly  1124 PLKINDEI----------TIIPQPASK 1140
            ||:..|.:          ..||.|.|:
  Fly   409 PLESVDSLPHEPALDTGGVTIPAPPSE 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MEP-1NP_001137875.1 BSP_II <121..>226 CDD:283165
C2H2 Zn finger 951..977 CDD:275371 9/44 (20%)
C2H2 Zn finger 989..1010 CDD:275371 5/20 (25%)
CG11456NP_001262130.1 C2H2 Zn finger 232..253 CDD:275368 6/20 (30%)
C2H2 Zn finger 261..281 CDD:275368 2/19 (11%)
C2H2 Zn finger 289..309 CDD:275368 5/29 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24408
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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