DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MEP-1 and hang

DIOPT Version :9

Sequence 1:NP_001137875.1 Gene:MEP-1 / 38327 FlyBaseID:FBgn0035357 Length:1152 Species:Drosophila melanogaster
Sequence 2:NP_001138204.1 Gene:hang / 32613 FlyBaseID:FBgn0026575 Length:2223 Species:Drosophila melanogaster


Alignment Length:1327 Identity:241/1327 - (18%)
Similarity:407/1327 - (30%) Gaps:409/1327 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 VEEQQEEDVHLPEAPSNEKLELLSA-GGKDISKEDVAQAS-----------PQAPVADEIMEVDG 103
            |:.||...:......||....::|| ....:|....|.||           |..|:.||.::.| 
  Fly   448 VQHQQAGGLATSTTTSNPPGSVVSATPSASVSASASASASVSTAPLLMPPLPAMPIKDEPIDTD- 511

  Fly   104 TEDVEENEVENDDEDSQITSSSSKEPKLDEEDEEATTNGDGDHEPEDEDDAQKIGSTAENSCEAE 168
                ::.::::.||...:...:....:.:.|.:...|..|.|:             ||::...|.
  Fly   512 ----DDYQMKSIDESDDMVDPTMFLERSEHEGDVPLTASDYDY-------------TAQHGVNAS 559

  Fly   169 DPLGAVTVPDDELASGKKAHLDGEESVAS----------EGVVEEEPPAKQENGFGASPNQKENG 223
            ..  |.::|.:.:|:...|   |:..|||          .............|.|..|.:...| 
  Fly   560 SV--AASLPPNAVANVAAA---GDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPHN- 618

  Fly   224 QASIAEARAAIAPSDGGVVNLDEDSDEEMEDITEHKEPAKPTEKAAKPASSSGGESSDDA----- 283
             ..|.:...|:|.:            .||    :....|..|.:|.:.|.::||..|...     
  Fly   619 -TPITKPTPALAAA------------LEM----QRAAAAAATAEANRAAGAAGGNISTQKYRQVV 666

  Fly   284 --VLIASDSDTESAAPPPPVKKLPPVVKAIPPPPVQDDEDDDDDDDCVVIEDDTPLSISPSGKRK 346
              ..|..:........|...:.|      :....|:..|.:|:     .:|....::.....|..
  Fly   667 MNAFIKCEGGGYDYDNPEQYRPL------LTRDKVEFIEQNDE-----FLEQYQTMTCRCCNKYF 720

  Fly   347 SDLDDLQLQQPSHKRQR-SSTPSGM--GQLTIKDARSLMPLDGSPSSVSGPRDSIYPVTITNAVT 408
            |...:..    :|.|:: ...|..:  ..|.:.|:::|.      .|....|:.|....:.||:.
  Fly   721 STYKNFM----AHVRKKYPQLPRNLCFNCLKMNDSKALF------ISHLKKRNCINLFRVLNALR 775

  Fly   409 GAATNLGVVP----------PKLVPMAGGMSASPVQLNPPTLSLTGLPSMTNNANLLPGLTDDMF 463
            |..|.: |||          ...:|:|.. .|..|.:|.||::.:|........:..|.      
  Fly   776 GKTTTV-VVPIADDVADDGATGSIPVADA-GAGVVAMNSPTVTASGEVVTPGGGSERPE------ 832

  Fly   464 VLEAPSFIVPYIYEKPPRENICEVV-KAIETKYALSAEDLAEADKGDEFDMMTEQNKEDKPADQA 527
            .|.|...:|..:||       |::. |...||:..         :...:|...:..::|..:.|.
  Fly   833 KLRAKELLVNKLYE-------CKLCPKGFRTKHEF---------RTHVYDKHADVQRKDNNSIQC 881

  Fly   528 DESGKKKKKKRGDDESWSEQSDDDDDEDDDDDSESGVRTKVLIKEA-------------NDDLSA 579
            ...|             .:.:|..|.....::.:..||.:.:..:|             .|.|..
  Fly   882 SFCG-------------LDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGG 933

  Fly   580 LKVAIKPAAALATAGGVSVNNPGGNKPGQENYFESPLGKFFMDIGVGLVQEYVQSDLLRLQKRKM 644
            :........|..|..|::.:|...:.||:    .|.||.    :|||...|..:|..........
  Fly   934 VGGGAVSDNASTTGSGMARSNSMEHSPGK----RSLLGA----LGVGSSAEESRSSSAAPPLTST 990

  Fly   645 RKAQVQN-------SKEFEMAINALSGNLQASKTKNAPFKFRMKRCEFCNFKSESAMAMANHYET 702
            .|....|       :.....|....|.|..||..|:..|....:.|..|..:..:...:..|.|:
  Fly   991 PKLAGGNQVGGGGSTSASAAAAAQSSANRDASAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMES 1055

  Fly   703 PHMNGV--LYKCNFCTFEIRNATEIVYHMEAVHNI-KARLIKPLPYHQCPNCGFE---DNGKAKL 761
            .|.|.:  .|||..|.......:.:..||..||.: |.|       |   :.|||   :....||
  Fly  1056 KHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNR-------H---SGGFEYIVNADAVKL 1110

  Fly   762 A----------RHQPVCAKKFRPELNLAPPNDWEAPAKIPRIKPRHGLVGTATAYQAMAAQAAAQ 816
            |          |:..|..............::.|.|..:.:               .|....::.
  Fly  1111 ADGSTPNVYTGRYDYVMKDLMSITNGGTLDDEEEEPGSVAK---------------KMRLDDSSN 1160

  Fly   817 KAALANIQQQQAAAQARNNLQAAALAAQNAAKMRQRAPQPPKQNIVRNPAPVRGGNAMNAGLSLP 881
            .::|..:..||......|.:.:..:...|..:....|                 .||:||.|:  
  Fly  1161 NSSLVGVASQQKECPICNAVFSNNIGLSNHMRSHYTA-----------------SNAVNAALA-- 1206

  Fly   882 NSYQLAAGQLVQASKKPMAGQPSISITPLP-RQSSVGAGAGASSSKAPQAAAGMKP---GQSP-- 940
                 ||.::.         ..|::||..| ..|.:|.| |..|..||...|.:.|   .|:|  
  Fly  1207 -----AANRMT---------PKSLTITATPATDSELGVG-GTMSESAPATPANVPPAMANQTPQE 1256

  Fly   941 ----------SGNNKAQFVICEICDGYIKDLEQLRNHMQWMHKV--------------------- 974
                      :.:.:.:.:.|.||.......:..|.||...|:|                     
  Fly  1257 QAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGL 1321

  Fly   975 -----KIHPKMIYNR---PPLNCQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGK------ 1025
                 |:|.|.|.:.   ....|..|...:.::..|::|....|.|.::|...:|:...      
  Fly  1322 KVHLFKVHGKAIKDEMIIKQFECDVCSIVYSSESELQQHKRSVHKLTSASASTSASTSSKIDDDS 1386

  Fly  1026 --DAGR---------------------------------------------------------CP 1031
              |.|:                                                         |.
  Fly  1387 LMDDGKPTSSDLADLSTLAAGGSTASAPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCK 1451

  Fly  1032 VCGRMYQWK--LLNHVSRDHHMTLKPAHLSYKCTVCTATFGMYKQFETHVYTAH-----STVARK 1089
            .||.:|..:  |..|..:.|.....||    :|::|...|...:..:.|..|.:     ||.|.:
  Fly  1452 DCGNVYSGRKSLWVHRYKKHPQVPNPA----ECSLCRKVFFDRQMHDNHTPTCNRKPITSTGAHQ 1512

  Fly  1090 AMDSKKNS-------------------------------AQSSGSGSGAGMSRSSLGAANDSLLK 1123
            ..|.:.:|                               |.|.|:|:..|::..|..||..|   
  Fly  1513 QQDGQLHSHHTAKRTIFRHKTGDDDDEEDDDEQQQLEERANSDGNGTTVGVASGSTAAAGTS--- 1574

  Fly  1124 PLKINDEITIIPQPASK---PRITNME 1147
             |||.     ||:.|..   .|.|:.|
  Fly  1575 -LKIR-----IPEVACTICGARFTDQE 1595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MEP-1NP_001137875.1 BSP_II <121..>226 CDD:283165 19/114 (17%)
C2H2 Zn finger 951..977 CDD:275371 9/51 (18%)
C2H2 Zn finger 989..1010 CDD:275371 4/20 (20%)
hangNP_001138204.1 zf-AD 80..154 CDD:285071
C2H2 Zn finger 1036..1057 CDD:275368 4/20 (20%)
C2H2 Zn finger 1067..1088 CDD:275368 4/20 (20%)
C2H2 Zn finger 1279..1298 CDD:275371 5/18 (28%)
C2H2 Zn finger 1308..1325 CDD:275371 0/16 (0%)
C2H2 Zn finger 1420..1440 CDD:275368 0/19 (0%)
C2H2 Zn finger 1450..1468 CDD:275368 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24408
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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