DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MEP-1 and Zfp438

DIOPT Version :9

Sequence 1:NP_001137875.1 Gene:MEP-1 / 38327 FlyBaseID:FBgn0035357 Length:1152 Species:Drosophila melanogaster
Sequence 2:NP_001347376.1 Gene:Zfp438 / 240186 MGIID:2444919 Length:798 Species:Mus musculus


Alignment Length:974 Identity:160/974 - (16%)
Similarity:264/974 - (27%) Gaps:417/974 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 AAIAPSDGGVVNLDE---------DSDEEMEDITEHKEPAKPTEKAAK-PASSS----------- 275
            :::.|.|.|..|:..         .|..:...|.....|...|.:... |:|.|           
Mouse     5 SSVPPKDQGESNIRSGTTQSGKTLQSKSQFRTIAPKVVPKVLTSRVLPCPSSISDQGSLTLMPKP 69

  Fly   276 -GGESSDDAVL-IASDSDTESAAPPPPVKKLPPVVK---------AIPPPPVQDDEDDDDDDDCV 329
             |..:.:.|:: :|....|.|....|.|....||.|         .:|.|..|            
Mouse    70 LGMPTQNYALMQVAGQEGTFSLVAFPNVASAQPVQKPRMSTHENLKLPIPRYQ------------ 122

  Fly   330 VIEDDTPLSISPSGKRKSDLDDLQLQQPSHKRQRSSTPSGMGQLTIKDARSLMPLDGSPSSVSGP 394
                  ||| |...::|.||        |..:..||.|.|..|        |..|..||.:...|
Mouse   123 ------PLS-SQGLRKKQDL--------SSPKSGSSDPPGPSQ--------LCHLTSSPQAYPDP 164

  Fly   395 RDSIYPVTITNAVTGAATNLGVVPPKLVPMAGGMSASPVQLNPPTLSLTGLPSMTNNANLLPGLT 459
            ...                     |.|......::.||..:|..||:     |.....:|.|.:|
Mouse   165 HHK---------------------PSLWKQMPTLNPSPTNINTATLT-----SGVGQGDLSPLVT 203

  Fly   460 DDMFVLEAPSFIVPYIYEKPPRENICEVVKAIETKYALSAEDLAEADKGD-EFDMMTEQNKEDKP 523
                                   |.|                      || |...|.....||..
Mouse   204 -----------------------NSC----------------------GDLELSAMPVYTTEDSS 223

  Fly   524 ADQA-----DESGKKKKKKRGDDESWSEQSDDDDDEDDDDDSESGVRTKVLIKEANDDLSALKVA 583
            :.|:     .::|..:|                         |:.....:..:|..:.|::.:..
Mouse   224 SQQSLPASMQKAGCARK-------------------------EAPTTPAIASEELKEQLASAQTV 263

  Fly   584 IKPAAALATAGGVSVNNPGGNKPGQENYFESPLGKFFMDIGVGLVQEYVQSDLLRLQKRKMRKAQ 648
            :..|..|.:.                    .|.||..:            ..|.|::..::.|.:
Mouse   264 LSSAVQLLSV--------------------VPKGKLPI------------LPLPRVKTTEVGKVE 296

  Fly   649 VQNSKEFEMAINALSGNLQASKTKNAPFKFRMKRCEFCNFKSESAMAMANHYETPHMNGVLYKCN 713
                .:.:.|..:|||                     |....:..:::...::.           
Mouse   297 ----SDADNAELSLSG---------------------CRANCDERLSITEGFDA----------- 325

  Fly   714 FCTFEIRNATEIVYHMEAVHNIKARLIKPLPYHQCPNCGFEDNGKAKLARHQPVCAKKFRPELNL 778
                    ||||...:.|:|..|                            |..|...|.|...|
Mouse   326 --------ATEIASKIAALHGSK----------------------------QSACESAFCPVTKL 354

  Fly   779 -----APPND--------WEAPAKIPRIKPRHGLVGTATAYQAMAAQAAAQKAALANIQQQQAAA 830
                 |.|:.        |:.|.:|                  :|.|...:|..:         .
Mouse   355 DLSHKAKPSSGIKRRGRKWKVPDEI------------------LALQGKRRKCII---------G 392

  Fly   831 QARNNLQAAALAAQNAAKMRQRAPQPPKQNIVRNPAPVRGGNAMNAGLSLPNSYQLAAGQLVQAS 895
            ...:.::.|..:.|.|...:.|......:||:  |.||                      ||.::
Mouse   393 MCGDGIERARNSPQEARDQKPRVASRKYRNIM--PKPV----------------------LVLSA 433

  Fly   896 KKPMAGQPSISITPLPRQSSVG------------AGAGASSSKAPQAAAGMKPGQSPSGNNKAQF 948
            ..|:|...:: ::..|  ||:|            .|:..|.|..|:.::.::.|.|   ..|..:
Mouse   434 LAPLASHTAV-LSQAP--SSLGQDVLNNALPSKCLGSKQSDSSTPKPSSVLRNGFS---GIKKPW 492

  Fly   949 VICEICDGYIKDLEQLRNHMQWMHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHGLV 1013
            .:|.:|:          .|.|:.|.:..|.....||.|.:|..|:..:.....|..|:...||  
Mouse   493 HMCPVCN----------YHFQFKHHLLDHMNTHTNRRPYSCGICRKTYVRPGSLSAHMKLHHG-- 545

  Fly  1014 TSSMQEAANKGKDAGRCPVCGRMYQWKLLNHVSRDHHMTLKPAHLSYKCTVCTATFGMYKQFETH 1078
                                              |:|    |..| ..|..|...||..:.:..|
Mouse   546 ----------------------------------DNH----PKKL-VCCEFCAKVFGHVRVYFGH 571

  Fly  1079 VYTAHSTVAR--------KAMDSKKNSAQSSG-SGSGAGMSRSSLGAANDSLLKPLKINDEITI 1133
            :...|..|..        :..|:.||..:..| .|....:.|.:..:..:..|  |...||:.:
Mouse   572 LKEVHRVVISTEPSPSELQPGDTPKNKNRDPGMQGPDNSLERETKSSLEEDFL--LNQADEVKL 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MEP-1NP_001137875.1 BSP_II <121..>226 CDD:283165
C2H2 Zn finger 951..977 CDD:275371 5/25 (20%)
C2H2 Zn finger 989..1010 CDD:275371 4/20 (20%)
Zfp438NP_001347376.1 C2H2 Zn finger 495..515 CDD:275368 6/29 (21%)
zf-H2C2_2 507..532 CDD:372612 6/24 (25%)
zf-C2H2 521..543 CDD:333835 4/21 (19%)
C2H2 Zn finger 523..543 CDD:275368 4/19 (21%)
C2H2 Zn finger 554..573 CDD:275368 5/18 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24408
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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