DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MEP-1 and pzf-1

DIOPT Version :9

Sequence 1:NP_001137875.1 Gene:MEP-1 / 38327 FlyBaseID:FBgn0035357 Length:1152 Species:Drosophila melanogaster
Sequence 2:NP_001256688.1 Gene:pzf-1 / 188142 WormBaseID:WBGene00011505 Length:504 Species:Caenorhabditis elegans


Alignment Length:553 Identity:103/553 - (18%)
Similarity:170/553 - (30%) Gaps:208/553 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   683 CEFCNFKSESAMAMANHYETPHMNGVLYKCNFCTFEIRNATEIVYHMEAVHNIKARLIKPLPYHQ 747
            |..|........::..|....||  ..:.|..|...|.....:..||:..|||....|       
 Worm    14 CGICGKYFSDDESLREHRRQRHM--TCHMCLLCNRRIPENETLREHMKNKHNIWKLFI------- 69

  Fly   748 CPNCGFEDNGKAKLARHQPVCAKKFRPELNLAPPNDWEAPAKIPRIKPRHGLVGTATAYQAMAAQ 812
            |..|.:....:..|..|:.......||.|                :||           .||...
 Worm    70 CVCCNWSFGTEIYLKCHEECMKSTGRPGL----------------LKP-----------LAMPMT 107

  Fly   813 AAAQKAALANIQQQQAAAQARNNLQAAALAAQNAAKMRQRAPQPPKQNIVRNPAPVRGGNAMNAG 877
            |.|::|:..|...|..:....::                            :|:||.        
 Worm   108 APAREASALNTDPQNGSDDVPHS----------------------------SPSPVP-------- 136

  Fly   878 LSLPNSYQLAAGQLVQASKKPMAGQPSISITPLPRQSSVGAGAGASSSKAPQAAAGMKPGQS-PS 941
                   .:|...::|||        |:.:.|:.     .|...::|:..|:......|.:. |.
 Worm   137 -------MIAENSIIQAS--------SLKMEPIE-----SADRSSASTSTPRTLVSGTPREKIPC 181

  Fly   942 G-------------NNKAQFVI----CEICDGYIKDLEQLRNHMQWMHKVKIHPKMIYNRPPLNC 989
            |             .::.:|.:    |.:|:..|.:.|.:|:||:..|.:    |.:|     ||
 Worm   182 GFCGKDFFHEGSLREHRRRFHMTGHTCLLCNRQIPENETVRDHMKSQHNI----KKVY-----NC 237

  Fly   990 QKCQFRFFTDQGLERHLLGSHGLV---------------------TSSMQE------AANKGKD- 1026
            ..|.:.|..    :.||: ||...                     |:|:::      ....|.| 
 Worm   238 LCCNWTFLN----QVHLI-SHKTCLKQTGKPCCRPGHMEPLAIPRTASIRQFFTLKTETQSGDDD 297

  Fly  1027 --AG--------RCPVCGR-MYQWKLLNHVSRDHHMT--------------------LKPAH--- 1057
              ||        .|..||: .|..:.|:...|..||:                    ::..|   
 Worm   298 SAAGSQLFSARLSCKSCGKFFYSERSLSKHHRQIHMSGHVCVLCNHQMPKTVTVQEHMEKEHNIR 362

  Fly  1058 LSYKCTVCTATFGMYKQFETHVYTAHS----------TVARKAMDS-----KKNSAQ-----SSG 1102
            |.:.|..|..:|...:...:||.....          .:.|.|.||     |::.||     |:.
 Worm   363 LVFNCRCCNWSFATRRCLMSHVECLKKAGDARNVKPVAIPRMAADSILQSLKESEAQEYPDFSAA 427

  Fly  1103 SGSGAGMSRSSLGAANDSLLKPLKI-NDEITII 1134
            |.:.:|.: |:|........|.||| .|.:.|:
 Worm   428 STTSSGPA-STLKTPRMDFKKNLKICTDAVQIL 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MEP-1NP_001137875.1 BSP_II <121..>226 CDD:283165
C2H2 Zn finger 951..977 CDD:275371 8/25 (32%)
C2H2 Zn finger 989..1010 CDD:275371 5/20 (25%)
pzf-1NP_001256688.1 COG5236 <13..>62 CDD:227561 10/49 (20%)
C2H2 Zn finger 181..202 CDD:275368 1/20 (5%)
C2H2 Zn finger 208..229 CDD:275368 7/20 (35%)
C2H2 Zn finger 237..253 CDD:275368 5/20 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24408
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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