DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MEP-1 and pzf-1

DIOPT Version :10

Sequence 1:NP_647733.1 Gene:MEP-1 / 38327 FlyBaseID:FBgn0035357 Length:1152 Species:Drosophila melanogaster
Sequence 2:NP_001256688.1 Gene:pzf-1 / 188142 WormBaseID:WBGene00011505 Length:504 Species:Caenorhabditis elegans


Alignment Length:553 Identity:103/553 - (18%)
Similarity:170/553 - (30%) Gaps:208/553 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   683 CEFCNFKSESAMAMANHYETPHMNGVLYKCNFCTFEIRNATEIVYHMEAVHNIKARLIKPLPYHQ 747
            |..|........::..|....||  ..:.|..|...|.....:..||:..|||....|       
 Worm    14 CGICGKYFSDDESLREHRRQRHM--TCHMCLLCNRRIPENETLREHMKNKHNIWKLFI------- 69

  Fly   748 CPNCGFEDNGKAKLARHQPVCAKKFRPELNLAPPNDWEAPAKIPRIKPRHGLVGTATAYQAMAAQ 812
            |..|.:....:..|..|:.......||.|                :||           .||...
 Worm    70 CVCCNWSFGTEIYLKCHEECMKSTGRPGL----------------LKP-----------LAMPMT 107

  Fly   813 AAAQKAALANIQQQQAAAQARNNLQAAALAAQNAAKMRQRAPQPPKQNIVRNPAPVRGGNAMNAG 877
            |.|::|:..|...|..:....::                            :|:||.        
 Worm   108 APAREASALNTDPQNGSDDVPHS----------------------------SPSPVP-------- 136

  Fly   878 LSLPNSYQLAAGQLVQASKKPMAGQPSISITPLPRQSSVGAGAGASSSKAPQAAAGMKPGQS-PS 941
                   .:|...::|||        |:.:.|:.     .|...::|:..|:......|.:. |.
 Worm   137 -------MIAENSIIQAS--------SLKMEPIE-----SADRSSASTSTPRTLVSGTPREKIPC 181

  Fly   942 G-------------NNKAQFVI----CEICDGYIKDLEQLRNHMQWMHKVKIHPKMIYNRPPLNC 989
            |             .::.:|.:    |.:|:..|.:.|.:|:||:..|.:    |.:|     ||
 Worm   182 GFCGKDFFHEGSLREHRRRFHMTGHTCLLCNRQIPENETVRDHMKSQHNI----KKVY-----NC 237

  Fly   990 QKCQFRFFTDQGLERHLLGSHGLV---------------------TSSMQE------AANKGKD- 1026
            ..|.:.|..    :.||: ||...                     |:|:::      ....|.| 
 Worm   238 LCCNWTFLN----QVHLI-SHKTCLKQTGKPCCRPGHMEPLAIPRTASIRQFFTLKTETQSGDDD 297

  Fly  1027 --AG--------RCPVCGR-MYQWKLLNHVSRDHHMT--------------------LKPAH--- 1057
              ||        .|..||: .|..:.|:...|..||:                    ::..|   
 Worm   298 SAAGSQLFSARLSCKSCGKFFYSERSLSKHHRQIHMSGHVCVLCNHQMPKTVTVQEHMEKEHNIR 362

  Fly  1058 LSYKCTVCTATFGMYKQFETHVYTAHS----------TVARKAMDS-----KKNSAQ-----SSG 1102
            |.:.|..|..:|...:...:||.....          .:.|.|.||     |::.||     |:.
 Worm   363 LVFNCRCCNWSFATRRCLMSHVECLKKAGDARNVKPVAIPRMAADSILQSLKESEAQEYPDFSAA 427

  Fly  1103 SGSGAGMSRSSLGAANDSLLKPLKI-NDEITII 1134
            |.:.:|.: |:|........|.||| .|.:.|:
 Worm   428 STTSSGPA-STLKTPRMDFKKNLKICTDAVQIL 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MEP-1NP_647733.1 C2H2 Zn finger 951..977 CDD:275371 8/25 (32%)
C2H2 Zn finger 989..1010 CDD:275371 5/20 (25%)
pzf-1NP_001256688.1 COG5236 <13..>62 CDD:227561 10/49 (20%)

Return to query results.
Submit another query.