DRSC/TRiP Functional Genomics Resources

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Protein Alignment MEP-1 and ztf-28

DIOPT Version :9

Sequence 1:NP_001137875.1 Gene:MEP-1 / 38327 FlyBaseID:FBgn0035357 Length:1152 Species:Drosophila melanogaster
Sequence 2:NP_503566.1 Gene:ztf-28 / 185364 WormBaseID:WBGene00018099 Length:272 Species:Caenorhabditis elegans


Alignment Length:197 Identity:41/197 - (20%)
Similarity:63/197 - (31%) Gaps:60/197 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   984 RPPLN----CQKCQFRFFTDQGLERHLLGSHGLVTSSMQEAANKGKDAGRCPVCGRMYQWK--LL 1042
            ||.|.    |..|...|.....|.||    ..||.|          |...|.:|.|....|  :.
 Worm    33 RPDLRGDFLCLSCGQNFKHGASLNRH----RKLVHS----------DEYTCMLCARKLYLKETVR 83

  Fly  1043 NHVSRDHHMTLKPAHLSYKCTVCTATFGMYKQFETHVYTAHSTVA-------RKAMDS------- 1093
            :|:..:|::     ...|.|..|..||...|....|......|.|       .|:.:|       
 Worm    84 DHMRNEHYL-----GQVYTCGCCNWTFSNKKALTEHAKAIQETGAPGDANPIAKSGNSPGSLLKS 143

  Fly  1094 -------------KKNSAQSSGSGSGAGMSRSSLGAANDSLLKPLKINDEITIIPQPASKPRITN 1145
                         .|:.:.|:.:.:.:..||.:.|:....|        |:.:.|:|..:|....
 Worm   144 PIQRAGFKLNRLLNKSLSPSTSNSTTSSSSRDASGSPQPEL--------ELKLEPEPEPEPNEEA 200

  Fly  1146 ME 1147
            :|
 Worm   201 LE 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MEP-1NP_001137875.1 BSP_II <121..>226 CDD:283165
C2H2 Zn finger 951..977 CDD:275371
C2H2 Zn finger 989..1010 CDD:275371 6/20 (30%)
ztf-28NP_503566.1 COG5236 <14..>114 CDD:227561 25/99 (25%)
C2H2 Zn finger 42..63 CDD:275368 7/24 (29%)
C2H2 Zn finger 69..90 CDD:275368 5/20 (25%)
C2H2 Zn finger 98..114 CDD:275368 5/15 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24408
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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