DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MEP-1 and C04F5.9

DIOPT Version :9

Sequence 1:NP_001137875.1 Gene:MEP-1 / 38327 FlyBaseID:FBgn0035357 Length:1152 Species:Drosophila melanogaster
Sequence 2:NP_504371.1 Gene:C04F5.9 / 178899 WormBaseID:WBGene00015451 Length:534 Species:Caenorhabditis elegans


Alignment Length:414 Identity:72/414 - (17%)
Similarity:124/414 - (29%) Gaps:143/414 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   746 HQCPNCGFEDNGKAKLARHQPVCAKKFRPELNLAPPNDWEAPAKIPRIKPRHGLVGTA-TAYQAM 809
            |:||.|..|....:||.||.         |.:|....||              |.|.. |.:...
 Worm     5 HRCPQCLLEFPFASKLQRHL---------ETHLITGGDW--------------LCGLCDTLFNRS 46

  Fly   810 AAQAAAQKAALANIQQQQAAAQARNNL-----QAAALAAQNAAKMRQRAPQPPKQNIVRNPAPVR 869
            ::.....:.:.|.::......:.:..|     :|......:.....:::|:.|            
 Worm    47 SSLTNHWRNSCAKVKMAFCDDELKEMLVYDLREAVFRMTLDHYSASEKSPEEP------------ 99

  Fly   870 GGNAMNAGLSLPNSYQLAAGQLVQASKKPMAGQPSISI---TPLPRQS-----SVGAGAGASSSK 926
                   |.|  :||:.|:..           :.||.|   ..:||.:     ||..|....:..
 Worm   100 -------GTS--SSYKTASDD-----------KTSICIYCNLLMPRGTLHHHYSVHTGRCCPAEI 144

  Fly   927 APQAAAGMKPGQSPSGNNKAQFVICEICDGYIKDLEQLRNHMQWMHKVKIHPKMIYNRPP-LNCQ 990
            .               .|.....:|::|....:..:.|.||  |.||.   .:::.:.|. .|.:
 Worm   145 T---------------QNSVVPYVCDLCGFGFRYKKSLYNH--WRHKC---TEVLAHFPDGGNIE 189

  Fly   991 KCQFRFFTDQGLER-HLLGSHGLVTSSMQEAANKGKDAG-------------------------- 1028
            ..:.....:..::| .::....|.:....|...| :|:|                          
 Worm   190 NQELNVMVEDLVKRAEVINPIELPSKRDGEDIEK-EDSGDIDDDEETSPYFTAPITALSFDLQDW 253

  Fly  1029 ---------RCPVCGRMYQ--WKLLNHVSRDHHMTLKPAHLSYKCTVCTATFGMYKQFETHVYTA 1082
                     .||.|.|.:.  .:|..| :...|.|.:|   .:.|.:|...|.     |..:..|
 Worm   254 NVENVSSTEECPKCNRYFHSLGRLDQH-THAFHGTARP---GFVCKLCRMKFA-----ENRILLA 309

  Fly  1083 HSTVARKAM-----DSKKNSAQSS 1101
            |.....|.|     |.||....|:
 Worm   310 HLRSGCKPMRVEVPDEKKRKKMSA 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MEP-1NP_001137875.1 BSP_II <121..>226 CDD:283165
C2H2 Zn finger 951..977 CDD:275371 8/25 (32%)
C2H2 Zn finger 989..1010 CDD:275371 1/21 (5%)
C04F5.9NP_504371.1 C2H2 Zn finger 7..27 CDD:275368 9/28 (32%)
C2H2 Zn finger 36..54 CDD:275368 2/17 (12%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24408
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.