DRSC/TRiP Functional Genomics Resources

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Protein Alignment MEP-1 and mep-1

DIOPT Version :10

Sequence 1:NP_647733.1 Gene:MEP-1 / 38327 FlyBaseID:FBgn0035357 Length:1152 Species:Drosophila melanogaster
Sequence 2:NP_502173.2 Gene:mep-1 / 178074 WormBaseID:WBGene00003218 Length:870 Species:Caenorhabditis elegans


Alignment Length:1139 Identity:263/1139 - (23%)
Similarity:413/1139 - (36%) Gaps:333/1139 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VVLPEGVAEPTTKLASAS---SSPKQSKPSADDVEQQVTTVEDDEEQVVEEQQEEDVHLPEAPSN 67
            |...|.|...||...|.|   :.|:.:..|:.|.|      .|..||:..||:|.   :.:|.:.
 Worm     2 VTADETVLATTTNTTSMSVEPTDPRSAGESSSDSE------PDTIEQLKAEQREV---MADAANG 57

  Fly    68 EKLELLSAGGKDISKEDVAQASPQAPVADEIMEVDGTEDVEENEVENDDEDSQITSSS---SKEP 129
            .::.    |.::..||:.|.|..      |::|:|.||:..:...:..||:....|:|   .:|.
 Worm    58 SEVN----GNQENGKEEAASADV------EVIEIDDTEESTDPSPDGSDENGDAASTSVPIEEEA 112

  Fly   130 KLDEEDEEATTNGDGDHEPEDEDDAQKIGSTAENSCEAEDPLGAVTVPDDELASGKKAHLDGEES 194
            :..:|.....|....:.|.:|:.|..:|         .|:|.|    ..::.|:|          
 Worm   113 RKKDEGASEVTVASSEIEQDDDGDVMEI---------TEEPNG----KSEDTANG---------- 154

  Fly   195 VASEGVVEEEPPAKQENGFGASPNQKENGQASIAEARAAIAPSDGGV------VNLDEDSDEEME 253
            ..:|.|::||.|....||......:||...:|:     .:..:..||      :.||:|.|:|::
 Worm   155 TVTEEVLDEEEPEPSVNGTTEIATEKEPEDSSM-----PVEQNGKGVKRPVECIELDDDDDDEIQ 214

  Fly   254 DITEHKEPAKPTEKAAKPASSSGGESSDDAVLIASDSDTESAAPPPPVKKLPPVVKAIPPPPVQD 318
            :|:   .|| |.:||          ..||                         |||...|    
 Worm   215 EIS---TPA-PAKKA----------KIDD-------------------------VKATSVP---- 236

  Fly   319 DEDDDDDDDCVVIEDDTPLSISPSGKRKSDLDDLQLQQPSHKRQRSSTPSGMGQLTIKDARSLMP 383
             |:|:::.                 .:|..||.|:......|.|.||             :|...
 Worm   237 -EEDNNEQ-----------------AQKRLLDKLEEYVKEQKDQPSS-------------KSRKV 270

  Fly   384 LDGSPSSVSGPRDSIYPVTITNAVTGAATNLGVVPPKLVPMAGGMSASPVQLNPPTLSLTGLPSM 448
            ||                          |.||.:            .:.||..|  ||:..|   
 Worm   271 LD--------------------------TLLGAI------------NAQVQKEP--LSVRKL--- 292

  Fly   449 TNNANLLPGLTDDMFVLEAPSFIVPYIYEKPPRENICEVVKAIETKYALSAEDLAEADKGDEFDM 513
                     :.|.:.||       |.....||.: :|                          |:
 Worm   293 ---------ILDKVLVL-------PNTISFPPSQ-VC--------------------------DL 314

  Fly   514 MTEQNKEDKPADQADESGKKKKKKRGDDESWSEQSDDDDDEDDDDDSESGVRTKVLIKEANDDLS 578
            :.|.:.|.......:....:::.|..|.|.                     |.:..:|:      
 Worm   315 LIEHDPEMPLTKVINRMFGEERPKLSDSEK---------------------RERAQLKQ------ 352

  Fly   579 ALKVAIKPAAALATAGGVSVNNPGGNKPGQENYFESPLGKFFMDIGVGLVQEYVQSDLLRLQKRK 643
                                :||..|           :.|..:|||..||||....|::.   .|
 Worm   353 --------------------HNPVPN-----------MTKLLVDIGQDLVQEATYCDIVH---AK 383

  Fly   644 MRKAQVQNSKEFEMAINALSGNLQASKTKNAPFKFRMKRCEFCNFKSESAMAMANHYETPHMNGV 708
            ......:|.:.::.....|....:..|.||.|:|.:|.||:.|.|::||.:.|:.|.|..|..|.
 Worm   384 NLPEVPKNLETYKQVAAQLKPVWETLKRKNEPYKLKMHRCDVCGFQTESKLVMSTHKENLHFTGS 448

  Fly   709 LYKCNFCTFEIRNATEIVYHMEAVHNIKARLIKPLPYHQCPNCGFEDNGKAKLARHQPVCAKKFR 773
            .::|..|.....:...:..|....|.:.|:..:....:.|..|..:.|.|....:|...|.|.:.
 Worm   449 KFQCTMCKETDTSEQRMKDHYFETHLVIAKSEEKESKYPCAICEEDFNFKGVREQHYKQCKKDYI 513

  Fly   774 PELNLAPPND----------WEAPAKIPRIKPRHGLVGTATA-----YQAMAAQAAAQKAALANI 823
            ...|:..|..          ||.|...|.|..:........|     .|.:..|.|||.||.|.:
 Worm   514 RIRNIMMPKQDDHLYINRWLWERPQLDPSILQQQQQAALQQAQQKKQQQLLHQQQAAQAAAAAQL 578

  Fly   824 QQQQAAAQARNNLQAAALAAQNAAKMRQRAPQPPKQNIVRNPAPVRGGN--------AMNAGL-- 878
            .::|...|.:...||.....|.||:.||.|....:|:.....|....||        ||.|.|  
 Worm   579 LRKQQLQQQQQQQQARLREQQQAAQFRQVAQLLQQQSAQAQRAQQNQGNVNHNTLIAAMQASLRR 643

  Fly   879 --SLPNSYQLAAGQLVQ---ASKKPMAGQPSISITPLPRQSSVGAGAGASSSKAPQAAAG---MK 935
              ...||  ||..||:|   |:.|...|...:       |::|.:....:|.|.|...:.   ..
 Worm   644 GGQQGNS--LAVSQLLQKQMAALKSQQGAQQL-------QAAVNSMRSQNSQKTPTHRSSKLVTT 699

  Fly   936 PGQSPSGNNKAQFVICEICDGYIKDLEQLRNHMQWMHKVKIHPKMIYNR---PPLNCQKCQFRFF 997
            |..:..|::.|...:|||||..:::.|:...|:|..||..: .|::.:.   .||.|.:|:.||:
 Worm   700 PSHATVGSSSAPTFVCEICDASVQEKEKYLQHLQTTHKQMV-GKVLQDMSQGAPLACSRCRDRFW 763

  Fly   998 TDQGLERHLLGSHGLVTSSMQEAANKGKDAGRCPVCGRMYQWKLLNHVSRDHHMTLKPAHLSYKC 1062
            |.:||||||:.||||||:.:...|.|.:|.|||..||:.|.:.:|.|:..||.:.|..|.:.|.|
 Worm   764 TYEGLERHLVMSHGLVTADLLLKAQKKEDGGRCKTCGKNYAFNMLQHLVADHQVKLCSAEIMYSC 828

  Fly  1063 TVCTATFGMYKQFETHVYTAH-------STVARK 1089
            .||......|:..|.|:.:.|       ||.|:|
 Worm   829 DVCAFKCSSYQTLEAHLTSNHPKGDKKTSTPAKK 862

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MEP-1NP_647733.1 C2H2 Zn finger 951..977 CDD:275371 10/25 (40%)
C2H2 Zn finger 989..1010 CDD:275371 11/20 (55%)
mep-1NP_502173.2 LGT <7..144 CDD:469786 38/164 (23%)
Agg_substance 72..>285 CDD:411439 70/358 (20%)

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