DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pxn and PTGS1

DIOPT Version :9

Sequence 1:NP_523891.2 Gene:Pxn / 38326 FlyBaseID:FBgn0011828 Length:1527 Species:Drosophila melanogaster
Sequence 2:NP_000953.2 Gene:PTGS1 / 5742 HGNCID:9604 Length:599 Species:Homo sapiens


Alignment Length:499 Identity:97/499 - (19%)
Similarity:182/499 - (36%) Gaps:168/499 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   794 ASLTAFRRLAPPIYENGFSMPVGWTKGMLYSGHAKPSARLVSTSLVATKEITPDARITHMVMQ-W 857
            ::::.:.|:.|.:.:: ...|:| |||.    ...|.|:|::...:..::..||.:.|:::.. :
Human   142 SNVSYYTRILPSVPKD-CPTPMG-TKGK----KQLPDAQLLARRFLLRRKFIPDPQGTNLMFAFF 200

  Fly   858 GQFLDHDLDHAIPSVSSESWDGIDCKKSCEMAPPCYPIEVPPNDPRVRNRRCIDVVRSSAICGSG 922
            .|...|..                                               .::|...|.|
Human   201 AQHFTHQF-----------------------------------------------FKTSGKMGPG 218

  Fly   923 MTSLFFDSVQHREQINQLTSYIDASQVYGYSTAFAQELRNLTSQEGLLR---------------- 971
            .|             ..|...:|...:||.:.....:||  ..::|.|:                
Human   219 FT-------------KALGHGVDLGHIYGDNLERQYQLR--LFKDGKLKYQVLDGEMYPPSVEEA 268

  Fly   972 -VGVHFPRQKDMLPFAAPQDGMDCRRNLDENTMSCFVSGDIRVNEQV-----GLLAMHTIWMREH 1030
             |.:|:||.   :|   ||..|                   .|.::|     ||:...|:|:|||
Human   269 PVLMHYPRG---IP---PQSQM-------------------AVGQEVFGLLPGLMLYATLWLREH 308

  Fly  1031 NRIASKLKQINSHWDGDTLYQEARKIVGAQMQHITFKQWLPLIIGESGMEMMGEY----QGY--- 1088
            ||:...||..:..|..:.|:|..|.|                :|||:...::.||    .||   
Human   309 NRVCDLLKAEHPTWGDEQLFQTTRLI----------------LIGETIKIVIEEYVQQLSGYFLQ 357

  Fly  1089 ---NPQLNPSIANEFAT-AALRFGHTIINPILH---RLNETFQPIPQGHLLLHKAFFAPWRLAYE 1146
               :|:|...:..::.. .|:.|.|     :.|   .:.::|:...|.:  .::.|.....:..:
Human   358 LKFDPELLFGVQFQYRNRIAMEFNH-----LYHWHPLMPDSFKVGSQEY--SYEQFLFNTSMLVD 415

  Fly  1147 GGVDPLMRGFLAVPAKLKTPDQNLNTELTEKLFQTAHAVALDLAAINIQRGRDHGMPGYNVYRKL 1211
            .||:.|:..|....|......:|::..:..        ||:|:    |:..|:..:..:|.|||.
Human   416 YGVEALVDAFSRQIAGRIGGGRNMDHHILH--------VAVDV----IRESREMRLQPFNEYRKR 468

  Fly  1212 CNLTVAQDFEDLAGEISSAEIRQKMKELYGHPDNVDVWLGGILE 1255
            ..:.....|::|.||   .|:..:::||||..|.::.:.|.:||
Human   469 FGMKPYTSFQELVGE---KEMAAELEELYGDIDALEFYPGLLLE 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxnNP_523891.2 LRR_RI 51..>161 CDD:238064
leucine-rich repeat 54..77 CDD:275380
LRR_8 55..112 CDD:290566
leucine-rich repeat 78..101 CDD:275380
leucine-rich repeat 102..125 CDD:275380
LRR_8 124..184 CDD:290566
leucine-rich repeat 126..149 CDD:275380
LRR_4 148..185 CDD:289563
leucine-rich repeat 150..173 CDD:275380
Ig 240..325 CDD:299845
IG_like 242..325 CDD:214653
I-set 366..450 CDD:254352
Ig 384..451 CDD:143165
I-set 458..546 CDD:254352
Ig 472..536 CDD:299845
I-set 553..644 CDD:254352
Ig 570..643 CDD:299845
An_peroxidase 777..1317 CDD:281139 97/499 (19%)
peroxidasin_like 898..1338 CDD:188658 82/394 (21%)
VWC 1465..1523 CDD:278520
PTGS1NP_000953.2 EGF_CA 32..69 CDD:238011
prostaglandin_endoperoxide_synthase 89..575 CDD:188648 97/499 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2408
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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