DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pxn and igsf9bb

DIOPT Version :9

Sequence 1:NP_523891.2 Gene:Pxn / 38326 FlyBaseID:FBgn0011828 Length:1527 Species:Drosophila melanogaster
Sequence 2:XP_009293693.1 Gene:igsf9bb / 569554 ZFINID:ZDB-GENE-091112-15 Length:1439 Species:Danio rerio


Alignment Length:1171 Identity:236/1171 - (20%)
Similarity:381/1171 - (32%) Gaps:362/1171 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 AKPQFL-VAPQDAQVAAGEQVELSCEVTGLPRPQITWMHNTQELGLEEQAQAEILPSGSLLIRSA 297
            |.|.|. ..||..:...|..:.|||...|.|:|.::|:.....  :::..:.:: ..|||.:.|.
Zfish   135 APPTFTDTPPQYVEAKEGGSITLSCTAFGNPKPSVSWLREGNP--VQDSTKYKV-SDGSLTLVSI 196

  Fly   298 DTSDMGIYQCIARNEMG-ALRSQPVRLVVNGGNHPLDSPIDARSNQVWADAGTPMHGATPLPSPL 361
            ...|.|.|.|.|.:|.| |:.:  .||:|.|                              |..:
Zfish   197 SREDRGAYTCRAYSEQGEAVHT--TRLLVQG------------------------------PPFI 229

  Fly   362 PSPPHFTHQPHDQIVALHGSGHVLLDCAASGWP---------QPDIQWFVNGRQLLQSTPSLQLQ 417
            .|||        :.:.::.|......|.|..:|         :.|..:|.|.   |:...|:.: 
Zfish   230 VSPP--------ENITVNISQDAFFTCQAEAYPGNLTYTWFWEEDNVFFKND---LKRRVSILI- 282

  Fly   418 ANGSLILLQPNQLSAGTYRCEARNSLG-SVQATARIELKELPEILTAPQSQTIKLGKAFVLECDA 481
             :||||:.|.....||.|.|...|||| ...|:|.:.:.....::..|....:.:|....:.|..
Zfish   283 -DGSLIISQVKPEDAGKYTCSPSNSLGRPPSASAYLTVHYPARVINMPPVIYVAIGLPGYIRCPV 346

  Fly   482 DGN-PLPTIDWQLNGVPL-----PGNTPDLQLENENTELVVGAARQEHAGVYRCTAHNENGETSV 540
            |.| |:.::.|:.:|:||     ||.:     :.|:..:.|....::..|.|.|..:|..|....
Zfish   347 DANPPVTSVKWKKDGLPLRIEKYPGWS-----QMEDGSIRVSEVTEDSLGTYTCVPYNSLGTMGP 406

  Fly   541 EATIKVERSQSPPQLAIEPSNLVAITGTTIELPCQADQPEDGLQISWRHDGRLIDPNVQLAEKYQ 605
            .....:.....|..|.:.........|..:.:||:| :.:....|:||.  ::..|:   ..|:.
Zfish   407 SPPAPLVLKDPPKFLVVPGGEYRQEAGRELVIPCEA-EGDPFPNITWRK--KVGKPS---RSKHN 465

  Fly   606 ISGAGSLFVKNVTIPDGGRYECQLKNQFGRASASALVTIRNNVDLAPGDRYVRIAFAEAAKEIDL 670
            :...|||..|:::..|.|.:||...|.....:||..:.:......||...:|.::...|....|.
Zfish   466 VLPRGSLQFKSLSKEDHGEWECVASNVATSITASTHLLVIGTSPHAPAKVHVTVSTTSANVSWDS 530

  Fly   671 AINNTLDMLFS-------NRSDKAPPNYGELLRVFRFPTGEARQLARAAE---IYERTLVNIRK- 724
            :.:...:..||       .|....|.::..:    ..|:|:...|.:..|   .|:.:::...| 
Zfish   531 SYDGGFEQTFSVWYGHVVKREQLGPHDWLSM----PVPSGQHWLLVQGLEPETAYQFSVLAQNKL 591

  Fly   725 ------------------------------------HVQEG--------DNLTMKSEEY--EFR- 742
                                                ..|:|        .|.|...:.|  :|| 
Zfish   592 GTGPFSEVVTVNTLVFPISTPEPLVLLTPPRCLTANRTQQGVLLTWIPPANHTSPIDHYIMDFRL 656

  Fly   743 ----------------DLLSREHLHLVAELSGCMEHREMPNCTDMCFHSRYRSIDGTCNNLQHPT 791
                            ::|:|:   |:.|  ...|.|.|....|:.  |...::.|..:....| 
Zfish   657 GERWDVLDDAIPAGETEILARD---LIQE--AWYEFRVMAVMEDLV--SEPSNVVGVSSTDYFP- 713

  Fly   792 WGASLTAFRRLAPPIYENGFSMPVGWTKGMLYSGHAKPSARLVSTSLVA-----------TKEIT 845
                       .|.:.:.|.:.||  ..|::.:.....:|.|.|| |.|           .:...
Zfish   714 -----------PPEVPDEGLARPV--VAGIVATICFLAAAILFST-LAACFVNKQRRRKLKRRRD 764

  Fly   846 PDARITH------MVMQWGQFLDHDLDHAI--PSVSSESWDGIDCKK------------------ 884
            |...|||      .....|:.....: .:|  ||.|||  ||:..||                  
Zfish   765 PPLSITHCRKSVETPSSSGKISPESI-RSIGPPSESSE--DGLRAKKFPQSPAKEELSLYKKTKR 826

  Fly   885 ---------SCEMAPPCYPIEVPPNDPRVRNRRCID------VVRSSAICGSGMTSLFFDSVQHR 934
                     |...|....|||:....|  ..|..:|      .|::..|.|       |..|:..
Zfish   827 AIISKKYSVSKHEAEATTPIELISRGP--DGRFVMDPTDMETPVKARRIEG-------FPFVEES 882

  Fly   935 EQINQLTSYIDASQVYGYSTAFAQELRN------LTSQEGLLRVGVHFPRQKDMLPFAAPQDGMD 993
            :...:.....:.:...|........||.      .:|||..|:...:.||      |..|.:||.
Zfish   883 DLYPEFRQSDEENDDPGPMPPVMATLRPHQISPISSSQESYLQPPAYSPR------FQRPMEGMT 941

  Fly   994 CRRNLDENTMSCFVSGDIRVNEQVGLLAMH-----------------------TIWMREHNRIAS 1035
            ..     .|.....:|.||.       |.|                       ..:|.:.:.::|
Zfish   942 IM-----ETSRLQATGQIRG-------APHFRAFTHGQFYSYLGSPGEPEPPPPFYMPDTSPLSS 994

  Fly  1036 KLKQINSHWDGDTLYQEARKIVGAQMQHITFKQWLPLIIGESGMEMMGEYQ-----GYN-PQLNP 1094
            .:.....|.:|             ...|.|    :|..|||      ||.|     ||. |..:|
Zfish   995 VMSSPPYHLEG-------------PFGHPT----IPEEIGE------GEIQHYAVSGYTLPLAHP 1036

  Fly  1095 SIAN--------EFATAALRFGHTIINP--ILHRLNETFQPIPQGHLLLHKAFFAPWRLAYEGGV 1149
            |.:.        :|..|.:...|.|..|  .||...|...|.|   |:|..:...|..|.    |
Zfish  1037 STSRSPDIWQRPDFTFATIEGPHFIFPPPHPLHLHPEPPLPPP---LVLPPSALQPSTLQ----V 1094

  Fly  1150 DPLMRGFLAV----------PAKLK---TPDQNLNTELTEKLFQTAHAVALDLAAINIQRGRDHG 1201
            .| ..|.|.:          |:|:|   .|.:.|..:..:.|.|..|.              .||
Zfish  1095 SP-YPGILQLEAPKSRPGKSPSKVKPQGLPAKRLPMQEAQSLGQLRHT--------------SHG 1144

  Fly  1202 M 1202
            |
Zfish  1145 M 1145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxnNP_523891.2 LRR_RI 51..>161 CDD:238064
leucine-rich repeat 54..77 CDD:275380
LRR_8 55..112 CDD:290566
leucine-rich repeat 78..101 CDD:275380
leucine-rich repeat 102..125 CDD:275380
LRR_8 124..184 CDD:290566
leucine-rich repeat 126..149 CDD:275380
LRR_4 148..185 CDD:289563
leucine-rich repeat 150..173 CDD:275380
Ig 240..325 CDD:299845 24/85 (28%)
IG_like 242..325 CDD:214653 24/83 (29%)
I-set 366..450 CDD:254352 23/93 (25%)
Ig 384..451 CDD:143165 22/76 (29%)
I-set 458..546 CDD:254352 19/93 (20%)
Ig 472..536 CDD:299845 17/69 (25%)
I-set 553..644 CDD:254352 21/90 (23%)
Ig 570..643 CDD:299845 19/72 (26%)
An_peroxidase 777..1317 CDD:281139 107/536 (20%)
peroxidasin_like 898..1338 CDD:188658 74/369 (20%)
VWC 1465..1523 CDD:278520
igsf9bbXP_009293693.1 IG_like 30..113 CDD:214653
Ig 41..113 CDD:143165
IG_like 144..223 CDD:214653 24/83 (29%)
IGc2 151..208 CDD:197706 16/59 (27%)
I-set 227..319 CDD:254352 27/104 (26%)
Ig <263..319 CDD:299845 20/60 (33%)
Ig_2 326..414 CDD:290606 19/92 (21%)
IG_like 329..403 CDD:214653 18/78 (23%)
IG_like 424..504 CDD:214653 20/85 (24%)
Ig 440..504 CDD:299845 18/69 (26%)
FN3 509..604 CDD:238020 15/98 (15%)
FN3 620..704 CDD:238020 16/90 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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