DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pxn and cysu

DIOPT Version :9

Sequence 1:NP_523891.2 Gene:Pxn / 38326 FlyBaseID:FBgn0011828 Length:1527 Species:Drosophila melanogaster
Sequence 2:NP_650627.1 Gene:cysu / 42100 FlyBaseID:FBgn0038511 Length:753 Species:Drosophila melanogaster


Alignment Length:758 Identity:247/758 - (32%)
Similarity:373/758 - (49%) Gaps:130/758 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   657 VRIAFAEAAKEIDLAINNTLDMLFSNRSDKAP---PNYGELLRVFRFPTGEARQLARAAEIYERT 718
            :..|:.:|.|.|.:|         ..:||..|   ...||||.....      ||||.   |..:
  Fly    73 INAAYLDARKRIHVA---------QPKSDWKPEELATVGELLLDISI------QLART---YGLS 119

  Fly   719 LVNIRKHVQEGDNLTMKSEEYEFRDLLSREHLHLVAELSGCMEHREMPNCTDM-----CFHSRYR 778
            ...|.|.:...|  |.|:               |:.|:           |...     |...:||
  Fly   120 YEEIEKGLPTID--TSKT---------------LIREV-----------CPPFFAGVECRPGKYR 156

  Fly   779 SIDGTCNNLQHPTWGASLTAFRRLAPPIYENGFSMPVGWTKGMLYSGHAKPSARLVSTSLVATKE 843
            ..||.|||::||||||:...|:||..|:|.:|.:.|     .:..:|...|.:|:||      :.
  Fly   157 RFDGLCNNIEHPTWGAANAPFQRLIGPLYSDGINAP-----RISVTGRDLPFSRVVS------RT 210

  Fly   844 ITPDARI-----THMVMQWGQFLDHDLDHAIPSVSSESWDGID-------CKKSCEMAPP-CYPI 895
            :.||...     |.||:.||||:|||.     :::....|.|:       ||:...:..| |..|
  Fly   211 MHPDDGFHDHAGTVMVIAWGQFMDHDF-----TLTGTPLDPINRNDPEECCKRPLHLKHPYCNEI 270

  Fly   896 EVPPND--PRVRNRRCIDVVRS--SAICGSGMTSLFFDSVQHREQINQLTSYIDASQVYGYSTAF 956
            .:|.:|  .|:.|.:|||.||.  |...|..:.|        |:|.|.||..|||:.|||...:|
  Fly   271 RIPDDDYFYRLFNVKCIDFVRGFPSPRPGCKLGS--------RQQFNTLTGVIDANTVYGVKESF 327

  Fly   957 AQELRNLTSQEGLLRVGVHFPRQ--KDMLPFA--APQDGMDCRRNLDENTMSCFVSGDIRVNEQV 1017
            |::||  |...||:|:...|...  ||:||..  .|.:|  |.|  ...:|.||..|:||||||:
  Fly   328 ARKLR--TGYGGLMRMNPVFQEYGLKDLLPLKLDIPDEG--CTR--PNKSMYCFEGGEIRVNEQL 386

  Fly  1018 GLLAMHTIWMREHNRIASKLKQINSHWDGDTLYQEARKIVGAQMQHITFKQWLPLIIGESGMEMM 1082
            .|..|||:..|||||:|:.|.|||.|||.:||:||||:|..|.:||:||.::||:::|:..||..
  Fly   387 VLTCMHTLMAREHNRLATALAQINKHWDDETLFQEARRINIAIVQHVTFNEFLPILLGKEVMEKF 451

  Fly  1083 -------GEYQGYNPQLNPSIANEFATAALRFGHTIINPILHRLNETFQPIPQGHL--LLHKAFF 1138
                   |.:.||:..:||.|.:.||.||.||||:::...:.|.::..:.|....|  |:.:   
  Fly   452 GLVLQKDGYWDGYDSTVNPGIIDSFAGAAFRFGHSLLPTAVERWSKAHKFIASKRLSDLIRR--- 513

  Fly  1139 APWRLAYEGGVDPLMRGFLAVPAKLKTPDQNLNTELTEKLFQTAHA-VALDLAAINIQRGRDHGM 1202
             |:.|...|.:|....|.:...|  :..|.::..|:|..||:...| ..:||.:.|:||||:.|:
  Fly   514 -PYDLYRAGVLDEYFMGLMNQVA--QAMDDSITQEVTNHLFKKEGARFGMDLVSFNMQRGREFGI 575

  Fly  1203 PGYNVYRKLCNLTVAQDFEDLAGEISSAEIRQKMKELYGHPDNVDVWLGGILEDQVEGGKVGPLF 1267
            |||..:||.|.|..:..::::.|.:.: |...:...::.||.::|:|.||:.|..:.|..:||.|
  Fly   576 PGYMEFRKFCGLPTSNTWDEMYGSMPN-ETVLRYGSIFEHPADIDLWSGGVSEKSLPGSMLGPTF 639

  Fly  1268 QCLLVEQFRRLRDGDRLYYE---NPGVFSPEQLTQIKQANFGRVLCDVGDNFDQVTENVFILAKH 1329
            .|::..|...||.|||.:||   .|..|:||||.:|::|...|::||..|..|.|.....:|..|
  Fly   640 ACVIATQMSYLRRGDRFWYELPNQPSSFTPEQLQEIRKAKLSRLICDNTDLIDTVQIYPMVLPDH 704

  Fly  1330 QGGYK-KCED--IIGINLYLWQECGRCNSPPAIFD--SYIPQT 1367
            :...: .|:.  |..|:|..|.:.|.....|::::  :.||.|
  Fly   705 EINPRVPCKSGIIPSIDLTKWADFGGHGVDPSLYNYINEIPDT 747

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxnNP_523891.2 LRR_RI 51..>161 CDD:238064
leucine-rich repeat 54..77 CDD:275380
LRR_8 55..112 CDD:290566
leucine-rich repeat 78..101 CDD:275380
leucine-rich repeat 102..125 CDD:275380
LRR_8 124..184 CDD:290566
leucine-rich repeat 126..149 CDD:275380
LRR_4 148..185 CDD:289563
leucine-rich repeat 150..173 CDD:275380
Ig 240..325 CDD:299845
IG_like 242..325 CDD:214653
I-set 366..450 CDD:254352
Ig 384..451 CDD:143165
I-set 458..546 CDD:254352
Ig 472..536 CDD:299845
I-set 553..644 CDD:254352
Ig 570..643 CDD:299845
An_peroxidase 777..1317 CDD:281139 207/573 (36%)
peroxidasin_like 898..1338 CDD:188658 168/461 (36%)
VWC 1465..1523 CDD:278520
cysuNP_650627.1 An_peroxidase 155..692 CDD:281139 207/573 (36%)
peroxinectin_like 305..687 CDD:188655 149/394 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454584
Domainoid 1 1.000 107 1.000 Domainoid score I2172
eggNOG 1 0.900 - - E1_KOG2408
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276568at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11475
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

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