DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pxn and LPO

DIOPT Version :9

Sequence 1:NP_523891.2 Gene:Pxn / 38326 FlyBaseID:FBgn0011828 Length:1527 Species:Drosophila melanogaster
Sequence 2:NP_006142.1 Gene:LPO / 4025 HGNCID:6678 Length:712 Species:Homo sapiens


Alignment Length:695 Identity:263/695 - (37%)
Similarity:387/695 - (55%) Gaps:35/695 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   662 AEAAKEIDLAINNTLDMLFSNRSDKAPPNYGELLRVFRFPTGEARQLARAAEIYERTLVNIRKHV 726
            ::|..:::.|..::...|.:..|.:.|.: .:|....:...|..|...|..:::|.:|..:|:..
Human    39 SQAKVQVNKAFLDSRTRLKTAMSSETPTS-RQLSEYLKHAKGRTRTAIRNGQVWEESLKRLRQKA 102

  Fly   727 QEGDNLTMKSEEYEFRDLLSREHLHLVAELSGCMEHREMPNCTDMCFHSRYRSIDGTCNNLQHPT 791
            .. .|:|..|     .||.|     |..|: ||.....:..| |.|  |.||:|.|.|||.:.|.
Human   103 SL-TNVTDPS-----LDLTS-----LSLEV-GCGAPAPVVRC-DPC--SPYRTITGDCNNRRKPA 152

  Fly   792 WGASLTAFRRLAPPIYENGFSMPVGWTKGMLYSGHAKPSARLVSTSLVA--TKEITPDARITHMV 854
            .||:..|..|..|..||:|.|:|.|||.|...:|...|.||.||..:|.  .:|...|...:.:.
Human   153 LGAANRALARWLPAEYEDGLSLPFGWTPGKTRNGFPLPLAREVSNKIVGYLNEEGVLDQNRSLLF 217

  Fly   855 MQWGQFLDHDLDHAIPS-VSSESWDGIDCKKSCEMAPPCYPIEVPPNDPRVRNR-RCIDVVRSSA 917
            |||||.:|||||.|..: :.|..:....|.:.|.....|:||..|||||:...: :|:...|:..
Human   218 MQWGQIVDHDLDFAPDTELGSSEYSKAQCDEYCIQGDNCFPIMFPPNDPKAGTQGKCMPFFRAGF 282

  Fly   918 ICGSGMTSLFFDSVQHREQINQLTSYIDASQVYGYSTAFAQELRNLTSQEGLLRVGVHFPRQKDM 982
            :|.:..    :.|:. |||||.|||::|||.||....:.|..||||:|..||:.|....  ....
Human   283 VCPTPP----YKSLA-REQINALTSFLDASFVYSSEPSLASRLRNLSSPLGLMAVNQEV--SDHG 340

  Fly   983 LPFAAPQDG---MDCRRNLDENTMSCFVSGDIRVNEQVGLLAMHTIWMREHNRIASKLKQINSHW 1044
            ||: .|.|.   ..|........:.||::||.|.:|.:.|...||:::|||||:|.:||::|..|
Human   341 LPY-LPYDSKKPSPCEFINTTARVPCFLAGDSRASEHILLATSHTLFLREHNRLARELKRLNPQW 404

  Fly  1045 DGDTLYQEARKIVGAQMQHITFKQWLPLIIGESGMEMMGEYQGYNPQLNPSIANEFATAALRFGH 1109
            ||:.||||||||:||.:|.|||:.:||:::|:...:.:..||||:..::|.|:|.| |.|.||||
Human   405 DGEKLYQEARKILGAFVQIITFRDYLPILLGDHMQKWIPPYQGYSESVDPRISNVF-TFAFRFGH 468

  Fly  1110 TIINPILHRLNETFQPI-PQGHLLLHKAFFAPWRLAYEGGVDPLMRGFLAVPAKLKTPDQNLNTE 1173
            ..:...:.||:|.:||. |:..|.||..||..||:..:||:|||:||.||..:||...::.:..|
Human   469 LEVPSSMFRLDENYQPWGPEPELPLHTLFFNTWRMVKDGGIDPLVRGLLAKKSKLMKQNKMMTGE 533

  Fly  1174 LTEKLFQTAHAV-ALDLAAINIQRGRDHGMPGYNVYRKLCNLTVAQDFEDLAGEISSAEIRQKMK 1237
            |..||||..|.: ..||||||.||.||||.||||.:|..|:|:..|..|:|...:.|..:.:|:.
Human   534 LRNKLFQPTHRIHGFDLAAINTQRCRDHGQPGYNSWRAFCDLSQPQTLEELNTVLKSKMLAKKLL 598

  Fly  1238 ELYGHPDNVDVWLGGILEDQVEGGKVGPLFQCLLVEQFRRLRDGDRLYYENPGVFSPEQLTQIKQ 1302
            .|||.|||:|:|:|.|.|..||.|:||||..|||.:||:::|||||.::||||||:.||...:::
Human   599 GLYGTPDNIDIWIGAIAEPLVERGRVGPLLACLLGKQFQQIRDGDRFWWENPGVFTNEQKDSLQK 663

  Fly  1303 ANFGRVLCDVGDNFDQVTENVFILAKHQGGYKKCEDIIGINLYLW 1347
            .:|.|::|| .....:|..:.|....:...:..|..|..::|..|
Human   664 MSFSRLVCD-NTRITKVPRDPFWANSYPYDFVDCSAIDKLDLSPW 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxnNP_523891.2 LRR_RI 51..>161 CDD:238064
leucine-rich repeat 54..77 CDD:275380
LRR_8 55..112 CDD:290566
leucine-rich repeat 78..101 CDD:275380
leucine-rich repeat 102..125 CDD:275380
LRR_8 124..184 CDD:290566
leucine-rich repeat 126..149 CDD:275380
LRR_4 148..185 CDD:289563
leucine-rich repeat 150..173 CDD:275380
Ig 240..325 CDD:299845
IG_like 242..325 CDD:214653
I-set 366..450 CDD:254352
Ig 384..451 CDD:143165
I-set 458..546 CDD:254352
Ig 472..536 CDD:299845
I-set 553..644 CDD:254352
Ig 570..643 CDD:299845
An_peroxidase 777..1317 CDD:281139 231/548 (42%)
peroxidasin_like 898..1338 CDD:188658 186/445 (42%)
VWC 1465..1523 CDD:278520
LPONP_006142.1 An_peroxidase 138..674 CDD:281139 231/545 (42%)
myeloperoxidase_like 283..694 CDD:188656 178/420 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165150044
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2408
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276568at2759
OrthoFinder 1 1.000 - - FOG0000202
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11475
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
65.850

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