DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pxn and Ceacam9

DIOPT Version :9

Sequence 1:NP_523891.2 Gene:Pxn / 38326 FlyBaseID:FBgn0011828 Length:1527 Species:Drosophila melanogaster
Sequence 2:NP_036057.1 Gene:Ceacam9 / 26368 MGIID:1347247 Length:234 Species:Mus musculus


Alignment Length:241 Identity:52/241 - (21%)
Similarity:78/241 - (32%) Gaps:74/241 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 FLVAPQDAQVAAGEQVELSCEVTGLPRPQITWMHNTQELGLEEQA-------------------- 282
            ||:...:|..||...:||...:.......:.::|   |:.|..||                    
Mouse    22 FLLTCWNAPAAAELTIELVPPMVAEGGNSVLFVH---EMPLNVQAFYWYKQRDSTKSYEVARYLT 83

  Fly   283 ---QAEILP----------SGSLLIRSADTSDMGIYQCIARNEMGALRSQPVRLVVNGGNHPLDS 334
               |:..:|          |||||||:...:|.|:|..:..|.........|.|.|   ..|:..
Mouse    84 PTNQSSKMPQHSDRKTVFYSGSLLIRNVTKADSGVYTLLTFNTEMESELTHVHLEV---QEPVAQ 145

  Fly   335 PIDARSNQVWADAGTPMHGATPLPSPLPSPPHFTHQPHDQIVALHGSGHVLLDCAASGWPQPDIQ 399
            |      .:.||:                            .|:..:|.|.|.|.:.. |...|:
Mouse   146 P------TLQADS----------------------------TAVTEAGSVTLTCVSED-PGLSIR 175

  Fly   400 WFVNGRQLLQSTPSLQLQANGSLILLQPNQLSAGTYRCEARNSLGS 445
            |..|.:.|..:......|.|..|.:....:..||.|:||..|...|
Mouse   176 WLFNHQGLYFNDRMTLSQKNSRLTIDPAKREDAGEYQCEVSNGYSS 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxnNP_523891.2 LRR_RI 51..>161 CDD:238064
leucine-rich repeat 54..77 CDD:275380
LRR_8 55..112 CDD:290566
leucine-rich repeat 78..101 CDD:275380
leucine-rich repeat 102..125 CDD:275380
LRR_8 124..184 CDD:290566
leucine-rich repeat 126..149 CDD:275380
LRR_4 148..185 CDD:289563
leucine-rich repeat 150..173 CDD:275380
Ig 240..325 CDD:299845 25/117 (21%)
IG_like 242..325 CDD:214653 25/115 (22%)
I-set 366..450 CDD:254352 20/80 (25%)
Ig 384..451 CDD:143165 18/62 (29%)
I-set 458..546 CDD:254352
Ig 472..536 CDD:299845
I-set 553..644 CDD:254352
Ig 570..643 CDD:299845
An_peroxidase 777..1317 CDD:281139
peroxidasin_like 898..1338 CDD:188658
VWC 1465..1523 CDD:278520
Ceacam9NP_036057.1 Ig_CEACAM_D1 35..139 CDD:143251 22/106 (21%)
IG_like <86..139 CDD:214653 15/52 (29%)
IG_like 152..219 CDD:214653 19/95 (20%)
IGc2 159..220 CDD:197706 18/61 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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